Protein–RNA interactions for Protein: O09061

Psmb1, Proteasome subunit beta type-1, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmb1O09061 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Psmb1O09061 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Psmb1O09061 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Psmb1O09061 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Psmb1O09061 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Psmb1O09061 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.41■□□□□ 0.38
Psmb1O09061 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Psmb1O09061 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Psmb1O09061 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Psmb1O09061 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.4■□□□□ 0.38
Psmb1O09061 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
Psmb1O09061 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Psmb1O09061 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Psmb1O09061 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Psmb1O09061 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.4■□□□□ 0.38
Psmb1O09061 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Psmb1O09061 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Psmb1O09061 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.4■□□□□ 0.38
Psmb1O09061 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Psmb1O09061 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Psmb1O09061 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Psmb1O09061 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Psmb1O09061 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Psmb1O09061 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.4■□□□□ 0.38
Psmb1O09061 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Psmb1O09061 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Psmb1O09061 Reep4-203ENSMUST00000226563 1444 ntBASIC17.39■□□□□ 0.38
Psmb1O09061 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Psmb1O09061 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Psmb1O09061 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Psmb1O09061 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Psmb1O09061 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Psmb1O09061 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.39■□□□□ 0.37
Psmb1O09061 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Psmb1O09061 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Psmb1O09061 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.39■□□□□ 0.37
Psmb1O09061 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Psmb1O09061 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Psmb1O09061 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.39■□□□□ 0.37
Psmb1O09061 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Psmb1O09061 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Psmb1O09061 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Psmb1O09061 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Psmb1O09061 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Psmb1O09061 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Psmb1O09061 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.38■□□□□ 0.37
Psmb1O09061 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.38■□□□□ 0.37
Psmb1O09061 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Psmb1O09061 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Psmb1O09061 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.38■□□□□ 0.37
Psmb1O09061 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Psmb1O09061 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Psmb1O09061 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Psmb1O09061 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Psmb1O09061 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Psmb1O09061 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Psmb1O09061 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.37■□□□□ 0.37
Psmb1O09061 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Psmb1O09061 AA386476-201ENSMUST00000098781 1665 ntBASIC17.37■□□□□ 0.37
Psmb1O09061 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.37■□□□□ 0.37
Psmb1O09061 Gm29257-201ENSMUST00000186115 639 ntBASIC17.37■□□□□ 0.37
Psmb1O09061 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.37■□□□□ 0.37
Psmb1O09061 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.37■□□□□ 0.37
Psmb1O09061 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Psmb1O09061 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.37■□□□□ 0.37
Psmb1O09061 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Psmb1O09061 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Psmb1O09061 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Psmb1O09061 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Psmb1O09061 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Psmb1O09061 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Psmb1O09061 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Psmb1O09061 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Psmb1O09061 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
Psmb1O09061 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Psmb1O09061 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Psmb1O09061 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.36■□□□□ 0.37
Psmb1O09061 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.36■□□□□ 0.37
Psmb1O09061 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Psmb1O09061 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Psmb1O09061 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.36■□□□□ 0.37
Psmb1O09061 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.36■□□□□ 0.37
Psmb1O09061 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Psmb1O09061 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Psmb1O09061 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Psmb1O09061 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Psmb1O09061 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Psmb1O09061 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.35■□□□□ 0.37
Psmb1O09061 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Psmb1O09061 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Psmb1O09061 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Psmb1O09061 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Psmb1O09061 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Psmb1O09061 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Psmb1O09061 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Psmb1O09061 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.35■□□□□ 0.37
Psmb1O09061 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Psmb1O09061 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Psmb1O09061 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Psmb1O09061 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms