Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ebf3O08791 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ebf3O08791 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.89■□□□□ 0.78
Ebf3O08791 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ebf3O08791 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ebf3O08791 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ebf3O08791 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.89■□□□□ 0.77
Ebf3O08791 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ebf3O08791 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.89■□□□□ 0.77
Ebf3O08791 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Ebf3O08791 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ebf3O08791 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ebf3O08791 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ebf3O08791 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ebf3O08791 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ebf3O08791 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ebf3O08791 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Ebf3O08791 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.88■□□□□ 0.77
Ebf3O08791 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ebf3O08791 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ebf3O08791 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ebf3O08791 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ebf3O08791 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ebf3O08791 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.88■□□□□ 0.77
Ebf3O08791 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Ebf3O08791 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ebf3O08791 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ebf3O08791 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ebf3O08791 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.87■□□□□ 0.77
Ebf3O08791 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ebf3O08791 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ebf3O08791 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ebf3O08791 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ebf3O08791 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ebf3O08791 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ebf3O08791 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.87■□□□□ 0.77
Ebf3O08791 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.87■□□□□ 0.77
Ebf3O08791 Mir5133-201ENSMUST00000174955 77 ntBASIC19.87■□□□□ 0.77
Ebf3O08791 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.87■□□□□ 0.77
Ebf3O08791 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ebf3O08791 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ebf3O08791 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ebf3O08791 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ebf3O08791 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ebf3O08791 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ebf3O08791 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ebf3O08791 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ebf3O08791 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ebf3O08791 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.86■□□□□ 0.77
Ebf3O08791 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Ebf3O08791 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ebf3O08791 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ebf3O08791 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ebf3O08791 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ebf3O08791 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Ebf3O08791 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.85■□□□□ 0.77
Ebf3O08791 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ebf3O08791 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.85■□□□□ 0.77
Ebf3O08791 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.85■□□□□ 0.77
Ebf3O08791 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Ebf3O08791 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ebf3O08791 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Ebf3O08791 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.85■□□□□ 0.77
Ebf3O08791 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ebf3O08791 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ebf3O08791 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ebf3O08791 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ebf3O08791 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Ebf3O08791 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ebf3O08791 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ebf3O08791 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ebf3O08791 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Ebf3O08791 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ebf3O08791 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ebf3O08791 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.84■□□□□ 0.77
Ebf3O08791 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ebf3O08791 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Ebf3O08791 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ebf3O08791 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Ebf3O08791 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ebf3O08791 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ebf3O08791 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.83■□□□□ 0.77
Ebf3O08791 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.83■□□□□ 0.77
Ebf3O08791 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ebf3O08791 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ebf3O08791 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ebf3O08791 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ebf3O08791 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ebf3O08791 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ebf3O08791 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ebf3O08791 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ebf3O08791 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ebf3O08791 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ebf3O08791 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ebf3O08791 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ebf3O08791 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Ebf3O08791 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.82■□□□□ 0.76
Ebf3O08791 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Ebf3O08791 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ebf3O08791 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms