Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
ClockO08785 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ClockO08785 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
ClockO08785 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ClockO08785 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
ClockO08785 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ClockO08785 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ClockO08785 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.21■□□□□ 0.5
ClockO08785 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ClockO08785 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ClockO08785 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ClockO08785 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ClockO08785 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ClockO08785 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ClockO08785 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ClockO08785 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ClockO08785 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ClockO08785 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.2■□□□□ 0.5
ClockO08785 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ClockO08785 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ClockO08785 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ClockO08785 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.19■□□□□ 0.5
ClockO08785 BC021767-201ENSMUST00000126387 1716 ntBASIC18.19■□□□□ 0.5
ClockO08785 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
ClockO08785 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.19■□□□□ 0.5
ClockO08785 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.19■□□□□ 0.5
ClockO08785 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
ClockO08785 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ClockO08785 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ClockO08785 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ClockO08785 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ClockO08785 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
ClockO08785 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ClockO08785 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ClockO08785 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ClockO08785 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ClockO08785 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ClockO08785 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.18■□□□□ 0.5
ClockO08785 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ClockO08785 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ClockO08785 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ClockO08785 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ClockO08785 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ClockO08785 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ClockO08785 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ClockO08785 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ClockO08785 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ClockO08785 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.17■□□□□ 0.5
ClockO08785 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ClockO08785 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.17■□□□□ 0.5
ClockO08785 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ClockO08785 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ClockO08785 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ClockO08785 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ClockO08785 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ClockO08785 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ClockO08785 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ClockO08785 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.16■□□□□ 0.5
ClockO08785 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ClockO08785 Grk6-206ENSMUST00000224995 2971 ntBASIC18.16■□□□□ 0.5
ClockO08785 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ClockO08785 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ClockO08785 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ClockO08785 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.16■□□□□ 0.5
ClockO08785 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
ClockO08785 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.16■□□□□ 0.5
ClockO08785 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ClockO08785 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ClockO08785 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ClockO08785 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ClockO08785 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ClockO08785 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.16■□□□□ 0.5
ClockO08785 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ClockO08785 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ClockO08785 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ClockO08785 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.15■□□□□ 0.5
ClockO08785 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.15■□□□□ 0.5
ClockO08785 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ClockO08785 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ClockO08785 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.15■□□□□ 0.5
ClockO08785 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ClockO08785 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.15■□□□□ 0.5
ClockO08785 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
ClockO08785 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ClockO08785 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ClockO08785 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.5
ClockO08785 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ClockO08785 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ClockO08785 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ClockO08785 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
ClockO08785 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ClockO08785 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ClockO08785 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
ClockO08785 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ClockO08785 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
ClockO08785 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ClockO08785 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
ClockO08785 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ClockO08785 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClockO08785 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms