Protein–RNA interactions for Protein: J3QNH3

Gm21788, Predicted gene, 21788, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21788J3QNH3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Gm21788J3QNH3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Gm21788J3QNH3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Gm21788J3QNH3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm21788J3QNH3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Gm21788J3QNH3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm21788J3QNH3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.19■□□□□ 0.18
Gm21788J3QNH3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.19■□□□□ 0.18
Gm21788J3QNH3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm21788J3QNH3 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.19■□□□□ 0.18
Gm21788J3QNH3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm21788J3QNH3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm21788J3QNH3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm21788J3QNH3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.19■□□□□ 0.18
Gm21788J3QNH3 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm21788J3QNH3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm21788J3QNH3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm21788J3QNH3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm21788J3QNH3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
Gm21788J3QNH3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm21788J3QNH3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm21788J3QNH3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm21788J3QNH3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Gm21788J3QNH3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm21788J3QNH3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm21788J3QNH3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm21788J3QNH3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gm21788J3QNH3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.18■□□□□ 0.18
Gm21788J3QNH3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.18■□□□□ 0.18
Gm21788J3QNH3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.18■□□□□ 0.18
Gm21788J3QNH3 Spcs1-204ENSMUST00000226782 949 ntBASIC16.18■□□□□ 0.18
Gm21788J3QNH3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm21788J3QNH3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm21788J3QNH3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Gm21788J3QNH3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm21788J3QNH3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm21788J3QNH3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm21788J3QNH3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gm21788J3QNH3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.18■□□□□ 0.18
Gm21788J3QNH3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gm21788J3QNH3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gm21788J3QNH3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gm21788J3QNH3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm21788J3QNH3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm21788J3QNH3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.17■□□□□ 0.18
Gm21788J3QNH3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm21788J3QNH3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Gm21788J3QNH3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm21788J3QNH3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gm21788J3QNH3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm21788J3QNH3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Gm21788J3QNH3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.17■□□□□ 0.18
Gm21788J3QNH3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm21788J3QNH3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm21788J3QNH3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm21788J3QNH3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm21788J3QNH3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm21788J3QNH3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm21788J3QNH3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm21788J3QNH3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm21788J3QNH3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm21788J3QNH3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm21788J3QNH3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.16■□□□□ 0.18
Gm21788J3QNH3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm21788J3QNH3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm21788J3QNH3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm21788J3QNH3 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm21788J3QNH3 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Gm21788J3QNH3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm21788J3QNH3 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm21788J3QNH3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm21788J3QNH3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm21788J3QNH3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm21788J3QNH3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm21788J3QNH3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.15■□□□□ 0.18
Gm21788J3QNH3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm21788J3QNH3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.15■□□□□ 0.18
Gm21788J3QNH3 Gm43137-201ENSMUST00000198052 594 ntBASIC16.15■□□□□ 0.18
Gm21788J3QNH3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm21788J3QNH3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm21788J3QNH3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Gm21788J3QNH3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm21788J3QNH3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm21788J3QNH3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Gm21788J3QNH3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.14■□□□□ 0.18
Gm21788J3QNH3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm21788J3QNH3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm21788J3QNH3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm21788J3QNH3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm21788J3QNH3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm21788J3QNH3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.14■□□□□ 0.17
Gm21788J3QNH3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Gm21788J3QNH3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Gm21788J3QNH3 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm21788J3QNH3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm21788J3QNH3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Gm21788J3QNH3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Gm21788J3QNH3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm21788J3QNH3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Gm21788J3QNH3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms