Protein–RNA interactions for Protein: J3QM76

Ccdc179, Coiled-coil domain-containing protein 179, mousemouse

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc179J3QM76 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC12.16□□□□□ -0.46
Ccdc179J3QM76 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc179J3QM76 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc179J3QM76 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc179J3QM76 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc179J3QM76 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc179J3QM76 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Ccdc179J3QM76 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC12.16□□□□□ -0.46
Ccdc179J3QM76 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc179J3QM76 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc179J3QM76 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc179J3QM76 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc179J3QM76 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc179J3QM76 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc179J3QM76 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc179J3QM76 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc179J3QM76 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc179J3QM76 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc179J3QM76 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc179J3QM76 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc179J3QM76 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc179J3QM76 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc179J3QM76 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC12.15□□□□□ -0.46
Ccdc179J3QM76 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc179J3QM76 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc179J3QM76 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc179J3QM76 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Ccdc179J3QM76 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc179J3QM76 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc179J3QM76 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc179J3QM76 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc179J3QM76 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc179J3QM76 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc179J3QM76 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc179J3QM76 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc179J3QM76 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc179J3QM76 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc179J3QM76 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc179J3QM76 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc179J3QM76 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc179J3QM76 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc179J3QM76 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ccdc179J3QM76 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ccdc179J3QM76 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc179J3QM76 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc179J3QM76 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC12.14□□□□□ -0.47
Ccdc179J3QM76 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc179J3QM76 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc179J3QM76 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc179J3QM76 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc179J3QM76 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc179J3QM76 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ccdc179J3QM76 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc179J3QM76 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc179J3QM76 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc179J3QM76 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc179J3QM76 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc179J3QM76 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc179J3QM76 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc179J3QM76 Gm15043-201ENSMUST00000118843 1543 ntBASIC12.13□□□□□ -0.47
Ccdc179J3QM76 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc179J3QM76 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ccdc179J3QM76 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC12.13□□□□□ -0.47
Ccdc179J3QM76 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Ccdc179J3QM76 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc179J3QM76 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC12.13□□□□□ -0.47
Ccdc179J3QM76 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC12.13□□□□□ -0.47
Ccdc179J3QM76 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc179J3QM76 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc179J3QM76 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc179J3QM76 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc179J3QM76 Gm5576-201ENSMUST00000075809 1236 ntBASIC12.13□□□□□ -0.47
Ccdc179J3QM76 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc179J3QM76 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc179J3QM76 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc179J3QM76 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc179J3QM76 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ccdc179J3QM76 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc179J3QM76 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ccdc179J3QM76 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc179J3QM76 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc179J3QM76 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc179J3QM76 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc179J3QM76 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc179J3QM76 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc179J3QM76 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ccdc179J3QM76 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc179J3QM76 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc179J3QM76 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc179J3QM76 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc179J3QM76 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc179J3QM76 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc179J3QM76 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC12.12□□□□□ -0.47
Ccdc179J3QM76 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC12.12□□□□□ -0.47
Ccdc179J3QM76 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc179J3QM76 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc179J3QM76 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccdc179J3QM76 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc179J3QM76 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc179J3QM76 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms