Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.34■□□□□ 0.21
Gm3727J3QM54 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm3727J3QM54 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm3727J3QM54 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm3727J3QM54 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm3727J3QM54 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm3727J3QM54 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm3727J3QM54 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Gm3727J3QM54 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Gm3727J3QM54 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Gm3727J3QM54 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Gm3727J3QM54 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm3727J3QM54 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Gm3727J3QM54 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gm3727J3QM54 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm3727J3QM54 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm3727J3QM54 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.33■□□□□ 0.2
Gm3727J3QM54 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Gm3727J3QM54 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm3727J3QM54 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm3727J3QM54 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gm3727J3QM54 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm3727J3QM54 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm3727J3QM54 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm3727J3QM54 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm3727J3QM54 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm3727J3QM54 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Gm3727J3QM54 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm3727J3QM54 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm3727J3QM54 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm3727J3QM54 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm3727J3QM54 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm3727J3QM54 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm3727J3QM54 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.32■□□□□ 0.2
Gm3727J3QM54 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm3727J3QM54 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gm3727J3QM54 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.32■□□□□ 0.2
Gm3727J3QM54 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC16.32■□□□□ 0.2
Gm3727J3QM54 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Gm3727J3QM54 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm3727J3QM54 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gm3727J3QM54 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Gm3727J3QM54 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm3727J3QM54 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm3727J3QM54 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Gm3727J3QM54 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Gm3727J3QM54 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm3727J3QM54 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm3727J3QM54 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm3727J3QM54 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm3727J3QM54 Mir6236-201ENSMUST00000184437 123 ntBASIC16.31■□□□□ 0.2
Gm3727J3QM54 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm3727J3QM54 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.31■□□□□ 0.2
Gm3727J3QM54 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm3727J3QM54 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.31■□□□□ 0.2
Gm3727J3QM54 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm3727J3QM54 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3727J3QM54 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3727J3QM54 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3727J3QM54 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3727J3QM54 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3727J3QM54 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3727J3QM54 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3727J3QM54 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Gm3727J3QM54 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3727J3QM54 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3727J3QM54 Gm14523-201ENSMUST00000117260 558 ntBASIC16.3■□□□□ 0.2
Gm3727J3QM54 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3727J3QM54 Gm27502-201ENSMUST00000183495 199 ntBASIC16.3■□□□□ 0.2
Gm3727J3QM54 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.3■□□□□ 0.2
Gm3727J3QM54 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Gm3727J3QM54 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3727J3QM54 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3727J3QM54 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Gm3727J3QM54 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3727J3QM54 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3727J3QM54 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
Gm3727J3QM54 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3727J3QM54 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3727J3QM54 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3727J3QM54 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3727J3QM54 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3727J3QM54 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3727J3QM54 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3727J3QM54 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Gm3727J3QM54 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3727J3QM54 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3727J3QM54 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3727J3QM54 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3727J3QM54 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3727J3QM54 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3727J3QM54 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3727J3QM54 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3727J3QM54 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3727J3QM54 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.29■□□□□ 0.2
Gm3727J3QM54 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3727J3QM54 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.29■□□□□ 0.2
Gm3727J3QM54 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3727J3QM54 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.29■□□□□ 0.2
Gm3727J3QM54 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms