Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atf6F6VAN0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Atf6F6VAN0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Atf6F6VAN0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atf6F6VAN0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
Atf6F6VAN0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Atf6F6VAN0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atf6F6VAN0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atf6F6VAN0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atf6F6VAN0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Atf6F6VAN0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Atf6F6VAN0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atf6F6VAN0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Atf6F6VAN0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.67■□□□□ 0.74
Atf6F6VAN0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.67■□□□□ 0.74
Atf6F6VAN0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.67■□□□□ 0.74
Atf6F6VAN0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Atf6F6VAN0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atf6F6VAN0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atf6F6VAN0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Atf6F6VAN0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Atf6F6VAN0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.67■□□□□ 0.74
Atf6F6VAN0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atf6F6VAN0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atf6F6VAN0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atf6F6VAN0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atf6F6VAN0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Atf6F6VAN0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atf6F6VAN0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Atf6F6VAN0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atf6F6VAN0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
Atf6F6VAN0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Atf6F6VAN0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atf6F6VAN0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Atf6F6VAN0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atf6F6VAN0 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.66■□□□□ 0.74
Atf6F6VAN0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atf6F6VAN0 Gm43017-201ENSMUST00000198296 752 ntBASIC19.65■□□□□ 0.74
Atf6F6VAN0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atf6F6VAN0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atf6F6VAN0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atf6F6VAN0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atf6F6VAN0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atf6F6VAN0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Atf6F6VAN0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atf6F6VAN0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
Atf6F6VAN0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Atf6F6VAN0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.64■□□□□ 0.73
Atf6F6VAN0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atf6F6VAN0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.64■□□□□ 0.73
Atf6F6VAN0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Atf6F6VAN0 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Atf6F6VAN0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Atf6F6VAN0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Atf6F6VAN0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atf6F6VAN0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atf6F6VAN0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atf6F6VAN0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atf6F6VAN0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atf6F6VAN0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf6F6VAN0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf6F6VAN0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Atf6F6VAN0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf6F6VAN0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Atf6F6VAN0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf6F6VAN0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf6F6VAN0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf6F6VAN0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Atf6F6VAN0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atf6F6VAN0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Atf6F6VAN0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Atf6F6VAN0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atf6F6VAN0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atf6F6VAN0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
Atf6F6VAN0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atf6F6VAN0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Atf6F6VAN0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Atf6F6VAN0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atf6F6VAN0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atf6F6VAN0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atf6F6VAN0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.61■□□□□ 0.73
Atf6F6VAN0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atf6F6VAN0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.61■□□□□ 0.73
Atf6F6VAN0 Gm40848-201ENSMUST00000221998 324 ntBASIC19.61■□□□□ 0.73
Atf6F6VAN0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atf6F6VAN0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atf6F6VAN0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Atf6F6VAN0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atf6F6VAN0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atf6F6VAN0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Atf6F6VAN0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Atf6F6VAN0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atf6F6VAN0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Atf6F6VAN0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
Atf6F6VAN0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atf6F6VAN0 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Atf6F6VAN0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Atf6F6VAN0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atf6F6VAN0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atf6F6VAN0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms