Protein–RNA interactions for Protein: E9Q7U0

Kcnmb3, Potassium large conductance calcium-activated channel, subfamily M, beta member 3, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnmb3E9Q7U0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Kcnmb3E9Q7U0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.87■□□□□ 0.45
Kcnmb3E9Q7U0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Kcnmb3E9Q7U0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.87■□□□□ 0.45
Kcnmb3E9Q7U0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Kcnmb3E9Q7U0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Kcnmb3E9Q7U0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Kcnmb3E9Q7U0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Kcnmb3E9Q7U0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.86■□□□□ 0.45
Kcnmb3E9Q7U0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.86■□□□□ 0.45
Kcnmb3E9Q7U0 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.86■□□□□ 0.45
Kcnmb3E9Q7U0 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Kcnmb3E9Q7U0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Kcnmb3E9Q7U0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Kcnmb3E9Q7U0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Kcnmb3E9Q7U0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Kcnmb3E9Q7U0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Kcnmb3E9Q7U0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Kcnmb3E9Q7U0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Kcnmb3E9Q7U0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.85■□□□□ 0.45
Kcnmb3E9Q7U0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Kcnmb3E9Q7U0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.85■□□□□ 0.45
Kcnmb3E9Q7U0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Kcnmb3E9Q7U0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.85■□□□□ 0.45
Kcnmb3E9Q7U0 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Kcnmb3E9Q7U0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.85■□□□□ 0.45
Kcnmb3E9Q7U0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Kcnmb3E9Q7U0 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.85■□□□□ 0.45
Kcnmb3E9Q7U0 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.85■□□□□ 0.45
Kcnmb3E9Q7U0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Kcnmb3E9Q7U0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Kcnmb3E9Q7U0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.85■□□□□ 0.45
Kcnmb3E9Q7U0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Kcnmb3E9Q7U0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Kcnmb3E9Q7U0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Kcnmb3E9Q7U0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Kcnmb3E9Q7U0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Kcnmb3E9Q7U0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Kcnmb3E9Q7U0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Kcnmb3E9Q7U0 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Kcnmb3E9Q7U0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Kcnmb3E9Q7U0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Kcnmb3E9Q7U0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Kcnmb3E9Q7U0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Kcnmb3E9Q7U0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Kcnmb3E9Q7U0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Kcnmb3E9Q7U0 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Kcnmb3E9Q7U0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Kcnmb3E9Q7U0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Kcnmb3E9Q7U0 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.83■□□□□ 0.44
Kcnmb3E9Q7U0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Kcnmb3E9Q7U0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Kcnmb3E9Q7U0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Kcnmb3E9Q7U0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Kcnmb3E9Q7U0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Kcnmb3E9Q7U0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Kcnmb3E9Q7U0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Kcnmb3E9Q7U0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Kcnmb3E9Q7U0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.82■□□□□ 0.44
Kcnmb3E9Q7U0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Kcnmb3E9Q7U0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Kcnmb3E9Q7U0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.82■□□□□ 0.44
Kcnmb3E9Q7U0 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.82■□□□□ 0.44
Kcnmb3E9Q7U0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Kcnmb3E9Q7U0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.82■□□□□ 0.44
Kcnmb3E9Q7U0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Kcnmb3E9Q7U0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Kcnmb3E9Q7U0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Kcnmb3E9Q7U0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Kcnmb3E9Q7U0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kcnmb3E9Q7U0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kcnmb3E9Q7U0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kcnmb3E9Q7U0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kcnmb3E9Q7U0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kcnmb3E9Q7U0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kcnmb3E9Q7U0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kcnmb3E9Q7U0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kcnmb3E9Q7U0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kcnmb3E9Q7U0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.81■□□□□ 0.44
Kcnmb3E9Q7U0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Kcnmb3E9Q7U0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.81■□□□□ 0.44
Kcnmb3E9Q7U0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kcnmb3E9Q7U0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Kcnmb3E9Q7U0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kcnmb3E9Q7U0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Kcnmb3E9Q7U0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Kcnmb3E9Q7U0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Kcnmb3E9Q7U0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Kcnmb3E9Q7U0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Kcnmb3E9Q7U0 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Kcnmb3E9Q7U0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.8■□□□□ 0.44
Kcnmb3E9Q7U0 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.8■□□□□ 0.44
Kcnmb3E9Q7U0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Kcnmb3E9Q7U0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Kcnmb3E9Q7U0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Kcnmb3E9Q7U0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Kcnmb3E9Q7U0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.79■□□□□ 0.44
Kcnmb3E9Q7U0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Kcnmb3E9Q7U0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Kcnmb3E9Q7U0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms