Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rnf213E9Q555 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rnf213E9Q555 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC9.48□□□□□ -0.89
Rnf213E9Q555 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Rnf213E9Q555 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rnf213E9Q555 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rnf213E9Q555 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rnf213E9Q555 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Rnf213E9Q555 Gm21814-202ENSMUST00000203277 873 ntBASIC9.47□□□□□ -0.89
Rnf213E9Q555 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC9.47□□□□□ -0.89
Rnf213E9Q555 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rnf213E9Q555 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rnf213E9Q555 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rnf213E9Q555 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rnf213E9Q555 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC9.47□□□□□ -0.89
Rnf213E9Q555 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rnf213E9Q555 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rnf213E9Q555 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC9.47□□□□□ -0.89
Rnf213E9Q555 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC9.47□□□□□ -0.89
Rnf213E9Q555 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rnf213E9Q555 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Rnf213E9Q555 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Rnf213E9Q555 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rnf213E9Q555 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Rnf213E9Q555 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Rnf213E9Q555 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC9.47□□□□□ -0.89
Rnf213E9Q555 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Rnf213E9Q555 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rnf213E9Q555 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rnf213E9Q555 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Rnf213E9Q555 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rnf213E9Q555 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rnf213E9Q555 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC9.46□□□□□ -0.89
Rnf213E9Q555 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC9.46□□□□□ -0.89
Rnf213E9Q555 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rnf213E9Q555 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Rnf213E9Q555 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.89
Rnf213E9Q555 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rnf213E9Q555 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Rnf213E9Q555 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rnf213E9Q555 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rnf213E9Q555 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rnf213E9Q555 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Rnf213E9Q555 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rnf213E9Q555 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Rnf213E9Q555 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rnf213E9Q555 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Rnf213E9Q555 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rnf213E9Q555 Gm43403-201ENSMUST00000198011 1786 ntBASIC9.45□□□□□ -0.9
Rnf213E9Q555 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rnf213E9Q555 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rnf213E9Q555 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rnf213E9Q555 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Rnf213E9Q555 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rnf213E9Q555 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rnf213E9Q555 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rnf213E9Q555 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC9.45□□□□□ -0.9
Rnf213E9Q555 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Rnf213E9Q555 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rnf213E9Q555 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rnf213E9Q555 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Rnf213E9Q555 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rnf213E9Q555 Arhgef4-208ENSMUST00000211073 171 ntBASIC9.45□□□□□ -0.9
Rnf213E9Q555 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Rnf213E9Q555 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rnf213E9Q555 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rnf213E9Q555 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rnf213E9Q555 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Rnf213E9Q555 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Rnf213E9Q555 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Rnf213E9Q555 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Rnf213E9Q555 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Rnf213E9Q555 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Rnf213E9Q555 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Rnf213E9Q555 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Rnf213E9Q555 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC9.44□□□□□ -0.9
Rnf213E9Q555 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC9.44□□□□□ -0.9
Rnf213E9Q555 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC9.44□□□□□ -0.9
Rnf213E9Q555 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Rnf213E9Q555 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Rnf213E9Q555 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Rnf213E9Q555 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Rnf213E9Q555 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC9.44□□□□□ -0.9
Rnf213E9Q555 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Rnf213E9Q555 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rnf213E9Q555 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Rnf213E9Q555 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rnf213E9Q555 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rnf213E9Q555 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rnf213E9Q555 Gm13559-201ENSMUST00000120476 863 ntBASIC9.43□□□□□ -0.9
Rnf213E9Q555 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rnf213E9Q555 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Rnf213E9Q555 Gm33142-201ENSMUST00000193913 867 ntBASIC9.43□□□□□ -0.9
Rnf213E9Q555 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC9.43□□□□□ -0.9
Rnf213E9Q555 AC133598.3-202ENSMUST00000224219 531 ntBASIC9.43□□□□□ -0.9
Rnf213E9Q555 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rnf213E9Q555 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
Rnf213E9Q555 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rnf213E9Q555 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rnf213E9Q555 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms