Protein–RNA interactions for Protein: E9PXX9

Slc28a1, Sodium/nucleoside cotransporter, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a1E9PXX9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Slc28a1E9PXX9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Slc28a1E9PXX9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc28a1E9PXX9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slc28a1E9PXX9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Slc28a1E9PXX9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc28a1E9PXX9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc28a1E9PXX9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.09■□□□□ 0.49
Slc28a1E9PXX9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc28a1E9PXX9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.09■□□□□ 0.49
Slc28a1E9PXX9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc28a1E9PXX9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Slc28a1E9PXX9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc28a1E9PXX9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc28a1E9PXX9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slc28a1E9PXX9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slc28a1E9PXX9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc28a1E9PXX9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Slc28a1E9PXX9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc28a1E9PXX9 Etf1-202ENSMUST00000180351 108 ntBASIC18.08■□□□□ 0.48
Slc28a1E9PXX9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Slc28a1E9PXX9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Slc28a1E9PXX9 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.08■□□□□ 0.48
Slc28a1E9PXX9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc28a1E9PXX9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc28a1E9PXX9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc28a1E9PXX9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Slc28a1E9PXX9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Slc28a1E9PXX9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc28a1E9PXX9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Slc28a1E9PXX9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc28a1E9PXX9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
Slc28a1E9PXX9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.07■□□□□ 0.48
Slc28a1E9PXX9 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.07■□□□□ 0.48
Slc28a1E9PXX9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc28a1E9PXX9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Slc28a1E9PXX9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc28a1E9PXX9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Slc28a1E9PXX9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.07■□□□□ 0.48
Slc28a1E9PXX9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc28a1E9PXX9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc28a1E9PXX9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc28a1E9PXX9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc28a1E9PXX9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc28a1E9PXX9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc28a1E9PXX9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc28a1E9PXX9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Slc28a1E9PXX9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc28a1E9PXX9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.06■□□□□ 0.48
Slc28a1E9PXX9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Slc28a1E9PXX9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Slc28a1E9PXX9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc28a1E9PXX9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc28a1E9PXX9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc28a1E9PXX9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Slc28a1E9PXX9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Slc28a1E9PXX9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc28a1E9PXX9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc28a1E9PXX9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc28a1E9PXX9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc28a1E9PXX9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.06■□□□□ 0.48
Slc28a1E9PXX9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc28a1E9PXX9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Slc28a1E9PXX9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc28a1E9PXX9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Slc28a1E9PXX9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Slc28a1E9PXX9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Slc28a1E9PXX9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Slc28a1E9PXX9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc28a1E9PXX9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc28a1E9PXX9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc28a1E9PXX9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc28a1E9PXX9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc28a1E9PXX9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc28a1E9PXX9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc28a1E9PXX9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Slc28a1E9PXX9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Slc28a1E9PXX9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc28a1E9PXX9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc28a1E9PXX9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc28a1E9PXX9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Slc28a1E9PXX9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Slc28a1E9PXX9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.04■□□□□ 0.48
Slc28a1E9PXX9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc28a1E9PXX9 Grk6-206ENSMUST00000224995 2971 ntBASIC18.04■□□□□ 0.48
Slc28a1E9PXX9 Rarb-207ENSMUST00000225921 2756 ntBASIC18.04■□□□□ 0.48
Slc28a1E9PXX9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Slc28a1E9PXX9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc28a1E9PXX9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Slc28a1E9PXX9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc28a1E9PXX9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Slc28a1E9PXX9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc28a1E9PXX9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Slc28a1E9PXX9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.03■□□□□ 0.48
Slc28a1E9PXX9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.03■□□□□ 0.48
Slc28a1E9PXX9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.03■□□□□ 0.48
Slc28a1E9PXX9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.03■□□□□ 0.48
Slc28a1E9PXX9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc28a1E9PXX9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.03■□□□□ 0.48
Slc28a1E9PXX9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms