Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.19■□□□□ 0.34
Dchs1E9PVD3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Dchs1E9PVD3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Dchs1E9PVD3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Dchs1E9PVD3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Dchs1E9PVD3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Dchs1E9PVD3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Dchs1E9PVD3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Dchs1E9PVD3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Dchs1E9PVD3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Dchs1E9PVD3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Dchs1E9PVD3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Dchs1E9PVD3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Dchs1E9PVD3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Dchs1E9PVD3 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.18■□□□□ 0.34
Dchs1E9PVD3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Dchs1E9PVD3 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.18■□□□□ 0.34
Dchs1E9PVD3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Dchs1E9PVD3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Dchs1E9PVD3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Dchs1E9PVD3 Gm5643-201ENSMUST00000117081 966 ntBASIC17.18■□□□□ 0.34
Dchs1E9PVD3 Gm13146-201ENSMUST00000118508 780 ntBASIC17.18■□□□□ 0.34
Dchs1E9PVD3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.18■□□□□ 0.34
Dchs1E9PVD3 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.18■□□□□ 0.34
Dchs1E9PVD3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Dchs1E9PVD3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Dchs1E9PVD3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Dchs1E9PVD3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Dchs1E9PVD3 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Dchs1E9PVD3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Dchs1E9PVD3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Dchs1E9PVD3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Dchs1E9PVD3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Dchs1E9PVD3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Dchs1E9PVD3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Dchs1E9PVD3 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.17■□□□□ 0.34
Dchs1E9PVD3 Gm6211-202ENSMUST00000167849 925 ntBASIC17.17■□□□□ 0.34
Dchs1E9PVD3 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.17■□□□□ 0.34
Dchs1E9PVD3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Dchs1E9PVD3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Dchs1E9PVD3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Dchs1E9PVD3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Dchs1E9PVD3 Gm10819-201ENSMUST00000099988 561 ntBASIC17.17■□□□□ 0.34
Dchs1E9PVD3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Dchs1E9PVD3 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.17■□□□□ 0.34
Dchs1E9PVD3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Dchs1E9PVD3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Dchs1E9PVD3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Dchs1E9PVD3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Dchs1E9PVD3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.16■□□□□ 0.34
Dchs1E9PVD3 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Dchs1E9PVD3 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Dchs1E9PVD3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Dchs1E9PVD3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Dchs1E9PVD3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Dchs1E9PVD3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Dchs1E9PVD3 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.16■□□□□ 0.34
Dchs1E9PVD3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.16■□□□□ 0.34
Dchs1E9PVD3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Dchs1E9PVD3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Dchs1E9PVD3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Dchs1E9PVD3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Dchs1E9PVD3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dchs1E9PVD3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dchs1E9PVD3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Dchs1E9PVD3 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dchs1E9PVD3 Gm6576-201ENSMUST00000169678 883 ntBASIC17.15■□□□□ 0.34
Dchs1E9PVD3 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dchs1E9PVD3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.15■□□□□ 0.34
Dchs1E9PVD3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Dchs1E9PVD3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.14■□□□□ 0.33
Dchs1E9PVD3 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Dchs1E9PVD3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Dchs1E9PVD3 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.14■□□□□ 0.33
Dchs1E9PVD3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dchs1E9PVD3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Dchs1E9PVD3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Dchs1E9PVD3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dchs1E9PVD3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Dchs1E9PVD3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dchs1E9PVD3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dchs1E9PVD3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dchs1E9PVD3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dchs1E9PVD3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dchs1E9PVD3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dchs1E9PVD3 Gm13534-201ENSMUST00000121169 513 ntBASIC17.13■□□□□ 0.33
Dchs1E9PVD3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dchs1E9PVD3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Dchs1E9PVD3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.13■□□□□ 0.33
Dchs1E9PVD3 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.13■□□□□ 0.33
Dchs1E9PVD3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Dchs1E9PVD3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dchs1E9PVD3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Dchs1E9PVD3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Dchs1E9PVD3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Dchs1E9PVD3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Dchs1E9PVD3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dchs1E9PVD3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Dchs1E9PVD3 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dchs1E9PVD3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms