Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm28043E0CXC2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm28043E0CXC2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm28043E0CXC2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm28043E0CXC2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm28043E0CXC2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm28043E0CXC2 Gm21956-201ENSMUST00000179946 522 ntBASIC19.16■□□□□ 0.66
Gm28043E0CXC2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm28043E0CXC2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.16■□□□□ 0.66
Gm28043E0CXC2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gm28043E0CXC2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm28043E0CXC2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm28043E0CXC2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gm28043E0CXC2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm28043E0CXC2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.15■□□□□ 0.66
Gm28043E0CXC2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm28043E0CXC2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Gm28043E0CXC2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.15■□□□□ 0.66
Gm28043E0CXC2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gm28043E0CXC2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.15■□□□□ 0.66
Gm28043E0CXC2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm28043E0CXC2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm28043E0CXC2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm28043E0CXC2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.15■□□□□ 0.66
Gm28043E0CXC2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Gm28043E0CXC2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm28043E0CXC2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm28043E0CXC2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gm28043E0CXC2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.14■□□□□ 0.65
Gm28043E0CXC2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm28043E0CXC2 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.14■□□□□ 0.65
Gm28043E0CXC2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Gm28043E0CXC2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm28043E0CXC2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Gm28043E0CXC2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gm28043E0CXC2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm28043E0CXC2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm28043E0CXC2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Gm28043E0CXC2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.13■□□□□ 0.65
Gm28043E0CXC2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm28043E0CXC2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm28043E0CXC2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm28043E0CXC2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Gm28043E0CXC2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Gm28043E0CXC2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Gm28043E0CXC2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm28043E0CXC2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm28043E0CXC2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.12■□□□□ 0.65
Gm28043E0CXC2 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.12■□□□□ 0.65
Gm28043E0CXC2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm28043E0CXC2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.12■□□□□ 0.65
Gm28043E0CXC2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gm28043E0CXC2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gm28043E0CXC2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm28043E0CXC2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm28043E0CXC2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Gm28043E0CXC2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gm28043E0CXC2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Gm28043E0CXC2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm28043E0CXC2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm28043E0CXC2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Gm28043E0CXC2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm28043E0CXC2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm28043E0CXC2 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Gm28043E0CXC2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.11■□□□□ 0.65
Gm28043E0CXC2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm28043E0CXC2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm28043E0CXC2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm28043E0CXC2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm28043E0CXC2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Gm28043E0CXC2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.1■□□□□ 0.65
Gm28043E0CXC2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm28043E0CXC2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm28043E0CXC2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.1■□□□□ 0.65
Gm28043E0CXC2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm28043E0CXC2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm28043E0CXC2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm28043E0CXC2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Gm28043E0CXC2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm28043E0CXC2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm28043E0CXC2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.1■□□□□ 0.65
Gm28043E0CXC2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Gm28043E0CXC2 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.1■□□□□ 0.65
Gm28043E0CXC2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Gm28043E0CXC2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm28043E0CXC2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm28043E0CXC2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm28043E0CXC2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Gm28043E0CXC2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm28043E0CXC2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm28043E0CXC2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm28043E0CXC2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Gm28043E0CXC2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.09■□□□□ 0.65
Gm28043E0CXC2 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.09■□□□□ 0.65
Gm28043E0CXC2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gm28043E0CXC2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gm28043E0CXC2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gm28043E0CXC2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gm28043E0CXC2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gm28043E0CXC2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms