Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim30cD3YVI9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.86■□□□□ 0.93
Trim30cD3YVI9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.86■□□□□ 0.93
Trim30cD3YVI9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Trim30cD3YVI9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim30cD3YVI9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Trim30cD3YVI9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim30cD3YVI9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Trim30cD3YVI9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim30cD3YVI9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim30cD3YVI9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim30cD3YVI9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim30cD3YVI9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim30cD3YVI9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim30cD3YVI9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim30cD3YVI9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim30cD3YVI9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.85■□□□□ 0.93
Trim30cD3YVI9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Trim30cD3YVI9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim30cD3YVI9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim30cD3YVI9 Golph3-205ENSMUST00000228671 2842 ntBASIC20.85■□□□□ 0.93
Trim30cD3YVI9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim30cD3YVI9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim30cD3YVI9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.84■□□□□ 0.93
Trim30cD3YVI9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.84■□□□□ 0.93
Trim30cD3YVI9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
Trim30cD3YVI9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim30cD3YVI9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.84■□□□□ 0.93
Trim30cD3YVI9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
Trim30cD3YVI9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim30cD3YVI9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim30cD3YVI9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim30cD3YVI9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim30cD3YVI9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim30cD3YVI9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim30cD3YVI9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.83■□□□□ 0.93
Trim30cD3YVI9 Mir7075-201ENSMUST00000184187 82 ntBASIC20.83■□□□□ 0.93
Trim30cD3YVI9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.83■□□□□ 0.93
Trim30cD3YVI9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
Trim30cD3YVI9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim30cD3YVI9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim30cD3YVI9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim30cD3YVI9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim30cD3YVI9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Trim30cD3YVI9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Trim30cD3YVI9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim30cD3YVI9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim30cD3YVI9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim30cD3YVI9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim30cD3YVI9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.82■□□□□ 0.92
Trim30cD3YVI9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim30cD3YVI9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim30cD3YVI9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim30cD3YVI9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Trim30cD3YVI9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim30cD3YVI9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Trim30cD3YVI9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Trim30cD3YVI9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim30cD3YVI9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Trim30cD3YVI9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim30cD3YVI9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim30cD3YVI9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Trim30cD3YVI9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim30cD3YVI9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim30cD3YVI9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim30cD3YVI9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim30cD3YVI9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim30cD3YVI9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim30cD3YVI9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim30cD3YVI9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim30cD3YVI9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Trim30cD3YVI9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Trim30cD3YVI9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim30cD3YVI9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim30cD3YVI9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim30cD3YVI9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim30cD3YVI9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Trim30cD3YVI9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Trim30cD3YVI9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.79■□□□□ 0.92
Trim30cD3YVI9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim30cD3YVI9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Trim30cD3YVI9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim30cD3YVI9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim30cD3YVI9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim30cD3YVI9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim30cD3YVI9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim30cD3YVI9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim30cD3YVI9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim30cD3YVI9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim30cD3YVI9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim30cD3YVI9 Gm6139-201ENSMUST00000079261 882 ntBASIC20.78■□□□□ 0.92
Trim30cD3YVI9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim30cD3YVI9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.78■□□□□ 0.92
Trim30cD3YVI9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim30cD3YVI9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim30cD3YVI9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim30cD3YVI9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim30cD3YVI9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.77■□□□□ 0.92
Trim30cD3YVI9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim30cD3YVI9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms