Protein–RNA interactions for Protein: D3YUK0

Gm3259, Predicted gene 3259, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3259D3YUK0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm3259D3YUK0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gm3259D3YUK0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm3259D3YUK0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm3259D3YUK0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm3259D3YUK0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gm3259D3YUK0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Gm3259D3YUK0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm3259D3YUK0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm3259D3YUK0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm3259D3YUK0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Gm3259D3YUK0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gm3259D3YUK0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm3259D3YUK0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Gm3259D3YUK0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm3259D3YUK0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
Gm3259D3YUK0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gm3259D3YUK0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm3259D3YUK0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Gm3259D3YUK0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm3259D3YUK0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm3259D3YUK0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Gm3259D3YUK0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Gm3259D3YUK0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm3259D3YUK0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.21■□□□□ 0.67
Gm3259D3YUK0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3259D3YUK0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3259D3YUK0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3259D3YUK0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Gm3259D3YUK0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3259D3YUK0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
Gm3259D3YUK0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3259D3YUK0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.2■□□□□ 0.66
Gm3259D3YUK0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Gm3259D3YUK0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3259D3YUK0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3259D3YUK0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3259D3YUK0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3259D3YUK0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3259D3YUK0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Gm3259D3YUK0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Gm3259D3YUK0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Gm3259D3YUK0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3259D3YUK0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.19■□□□□ 0.66
Gm3259D3YUK0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.19■□□□□ 0.66
Gm3259D3YUK0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3259D3YUK0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3259D3YUK0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3259D3YUK0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3259D3YUK0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Gm3259D3YUK0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.18■□□□□ 0.66
Gm3259D3YUK0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3259D3YUK0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3259D3YUK0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Gm3259D3YUK0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3259D3YUK0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3259D3YUK0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm3259D3YUK0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gm3259D3YUK0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm3259D3YUK0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm3259D3YUK0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.17■□□□□ 0.66
Gm3259D3YUK0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
Gm3259D3YUK0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.17■□□□□ 0.66
Gm3259D3YUK0 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gm3259D3YUK0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm3259D3YUK0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm3259D3YUK0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm3259D3YUK0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm3259D3YUK0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm3259D3YUK0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.16■□□□□ 0.66
Gm3259D3YUK0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm3259D3YUK0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm3259D3YUK0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm3259D3YUK0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm3259D3YUK0 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gm3259D3YUK0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Gm3259D3YUK0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Gm3259D3YUK0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm3259D3YUK0 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.16■□□□□ 0.66
Gm3259D3YUK0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gm3259D3YUK0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3259D3YUK0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.15■□□□□ 0.66
Gm3259D3YUK0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Gm3259D3YUK0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3259D3YUK0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3259D3YUK0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Gm3259D3YUK0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Gm3259D3YUK0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3259D3YUK0 Gm26833-201ENSMUST00000180899 440 ntBASIC19.15■□□□□ 0.66
Gm3259D3YUK0 Gm27801-201ENSMUST00000184174 223 ntBASIC19.15■□□□□ 0.66
Gm3259D3YUK0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3259D3YUK0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Gm3259D3YUK0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3259D3YUK0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3259D3YUK0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3259D3YUK0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3259D3YUK0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3259D3YUK0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3259D3YUK0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Gm3259D3YUK0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms