Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a6B1AVK5 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a6B1AVK5 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a6B1AVK5 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a6B1AVK5 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Col4a6B1AVK5 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.09■□□□□ 0.81
Col4a6B1AVK5 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a6B1AVK5 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a6B1AVK5 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a6B1AVK5 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a6B1AVK5 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a6B1AVK5 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a6B1AVK5 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.09■□□□□ 0.81
Col4a6B1AVK5 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Col4a6B1AVK5 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Col4a6B1AVK5 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Col4a6B1AVK5 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Col4a6B1AVK5 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Col4a6B1AVK5 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Col4a6B1AVK5 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Col4a6B1AVK5 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.08■□□□□ 0.81
Col4a6B1AVK5 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Col4a6B1AVK5 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Col4a6B1AVK5 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Col4a6B1AVK5 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a6B1AVK5 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Col4a6B1AVK5 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.07■□□□□ 0.8
Col4a6B1AVK5 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a6B1AVK5 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.07■□□□□ 0.8
Col4a6B1AVK5 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a6B1AVK5 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a6B1AVK5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Col4a6B1AVK5 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Col4a6B1AVK5 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.06■□□□□ 0.8
Col4a6B1AVK5 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.06■□□□□ 0.8
Col4a6B1AVK5 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col4a6B1AVK5 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.06■□□□□ 0.8
Col4a6B1AVK5 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col4a6B1AVK5 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Col4a6B1AVK5 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.06■□□□□ 0.8
Col4a6B1AVK5 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Col4a6B1AVK5 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.06■□□□□ 0.8
Col4a6B1AVK5 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Col4a6B1AVK5 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col4a6B1AVK5 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a6B1AVK5 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Col4a6B1AVK5 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a6B1AVK5 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
Col4a6B1AVK5 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a6B1AVK5 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a6B1AVK5 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a6B1AVK5 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.05■□□□□ 0.8
Col4a6B1AVK5 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a6B1AVK5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Col4a6B1AVK5 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a6B1AVK5 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a6B1AVK5 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.04■□□□□ 0.8
Col4a6B1AVK5 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a6B1AVK5 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.04■□□□□ 0.8
Col4a6B1AVK5 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.04■□□□□ 0.8
Col4a6B1AVK5 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a6B1AVK5 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Col4a6B1AVK5 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Col4a6B1AVK5 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Col4a6B1AVK5 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a6B1AVK5 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Col4a6B1AVK5 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a6B1AVK5 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.03■□□□□ 0.8
Col4a6B1AVK5 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a6B1AVK5 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a6B1AVK5 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a6B1AVK5 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a6B1AVK5 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a6B1AVK5 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.03■□□□□ 0.8
Col4a6B1AVK5 Gm13836-201ENSMUST00000121159 501 ntBASIC20.03■□□□□ 0.8
Col4a6B1AVK5 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a6B1AVK5 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.03■□□□□ 0.8
Col4a6B1AVK5 Gm10698-201ENSMUST00000182663 604 ntBASIC20.03■□□□□ 0.8
Col4a6B1AVK5 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.03■□□□□ 0.8
Col4a6B1AVK5 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.03■□□□□ 0.8
Col4a6B1AVK5 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a6B1AVK5 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a6B1AVK5 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a6B1AVK5 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a6B1AVK5 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a6B1AVK5 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Col4a6B1AVK5 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Col4a6B1AVK5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a6B1AVK5 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a6B1AVK5 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.02■□□□□ 0.8
Col4a6B1AVK5 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a6B1AVK5 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a6B1AVK5 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a6B1AVK5 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a6B1AVK5 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a6B1AVK5 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Col4a6B1AVK5 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.01■□□□□ 0.79
Col4a6B1AVK5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a6B1AVK5 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Col4a6B1AVK5 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms