Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Sh2d4bA6X942 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Sh2d4bA6X942 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.5■□□□□ 0.87
Sh2d4bA6X942 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Sh2d4bA6X942 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.5■□□□□ 0.87
Sh2d4bA6X942 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh2d4bA6X942 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.5■□□□□ 0.87
Sh2d4bA6X942 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sh2d4bA6X942 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh2d4bA6X942 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Sh2d4bA6X942 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sh2d4bA6X942 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sh2d4bA6X942 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sh2d4bA6X942 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh2d4bA6X942 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Sh2d4bA6X942 Gm27801-201ENSMUST00000184174 223 ntBASIC20.49■□□□□ 0.87
Sh2d4bA6X942 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.49■□□□□ 0.87
Sh2d4bA6X942 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.49■□□□□ 0.87
Sh2d4bA6X942 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh2d4bA6X942 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Sh2d4bA6X942 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh2d4bA6X942 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sh2d4bA6X942 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.49■□□□□ 0.87
Sh2d4bA6X942 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Sh2d4bA6X942 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh2d4bA6X942 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh2d4bA6X942 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Sh2d4bA6X942 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh2d4bA6X942 Gm4968-201ENSMUST00000071458 858 ntBASIC20.48■□□□□ 0.87
Sh2d4bA6X942 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Sh2d4bA6X942 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh2d4bA6X942 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.48■□□□□ 0.87
Sh2d4bA6X942 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh2d4bA6X942 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sh2d4bA6X942 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh2d4bA6X942 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh2d4bA6X942 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh2d4bA6X942 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Sh2d4bA6X942 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sh2d4bA6X942 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sh2d4bA6X942 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Sh2d4bA6X942 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sh2d4bA6X942 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Sh2d4bA6X942 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Sh2d4bA6X942 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sh2d4bA6X942 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Sh2d4bA6X942 Gm8520-201ENSMUST00000186517 868 ntBASIC20.47■□□□□ 0.87
Sh2d4bA6X942 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.47■□□□□ 0.87
Sh2d4bA6X942 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sh2d4bA6X942 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sh2d4bA6X942 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sh2d4bA6X942 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.47■□□□□ 0.87
Sh2d4bA6X942 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh2d4bA6X942 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh2d4bA6X942 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh2d4bA6X942 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh2d4bA6X942 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh2d4bA6X942 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh2d4bA6X942 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh2d4bA6X942 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh2d4bA6X942 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh2d4bA6X942 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Sh2d4bA6X942 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh2d4bA6X942 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh2d4bA6X942 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.46■□□□□ 0.87
Sh2d4bA6X942 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh2d4bA6X942 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh2d4bA6X942 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh2d4bA6X942 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh2d4bA6X942 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh2d4bA6X942 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Sh2d4bA6X942 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sh2d4bA6X942 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sh2d4bA6X942 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.45■□□□□ 0.86
Sh2d4bA6X942 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Sh2d4bA6X942 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sh2d4bA6X942 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Sh2d4bA6X942 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Sh2d4bA6X942 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sh2d4bA6X942 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sh2d4bA6X942 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sh2d4bA6X942 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sh2d4bA6X942 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sh2d4bA6X942 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sh2d4bA6X942 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sh2d4bA6X942 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sh2d4bA6X942 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.44■□□□□ 0.86
Sh2d4bA6X942 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sh2d4bA6X942 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Sh2d4bA6X942 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.44■□□□□ 0.86
Sh2d4bA6X942 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sh2d4bA6X942 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sh2d4bA6X942 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sh2d4bA6X942 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sh2d4bA6X942 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Sh2d4bA6X942 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Sh2d4bA6X942 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sh2d4bA6X942 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sh2d4bA6X942 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.43■□□□□ 0.86
Sh2d4bA6X942 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms