Protein–RNA interactions for Protein: A6H6S0

Herc3, Hect domain and RLD 3, mousemouse

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc3A6H6S0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Herc3A6H6S0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Herc3A6H6S0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Herc3A6H6S0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Herc3A6H6S0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Herc3A6H6S0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Herc3A6H6S0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Herc3A6H6S0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Herc3A6H6S0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Herc3A6H6S0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Herc3A6H6S0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.24■□□□□ 0.99
Herc3A6H6S0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
Herc3A6H6S0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Herc3A6H6S0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Herc3A6H6S0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Herc3A6H6S0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Herc3A6H6S0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Herc3A6H6S0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Herc3A6H6S0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Herc3A6H6S0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Herc3A6H6S0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
Herc3A6H6S0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Herc3A6H6S0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.23■□□□□ 0.99
Herc3A6H6S0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.23■□□□□ 0.99
Herc3A6H6S0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Herc3A6H6S0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Herc3A6H6S0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Herc3A6H6S0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Herc3A6H6S0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Herc3A6H6S0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Herc3A6H6S0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Herc3A6H6S0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Herc3A6H6S0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Herc3A6H6S0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.22■□□□□ 0.99
Herc3A6H6S0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Herc3A6H6S0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Herc3A6H6S0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Herc3A6H6S0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Herc3A6H6S0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Herc3A6H6S0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Herc3A6H6S0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Herc3A6H6S0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Herc3A6H6S0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Herc3A6H6S0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Herc3A6H6S0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.21■□□□□ 0.99
Herc3A6H6S0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Herc3A6H6S0 Gm27801-201ENSMUST00000184174 223 ntBASIC21.21■□□□□ 0.99
Herc3A6H6S0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Herc3A6H6S0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Herc3A6H6S0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Herc3A6H6S0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Herc3A6H6S0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Herc3A6H6S0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Herc3A6H6S0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Herc3A6H6S0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Herc3A6H6S0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Herc3A6H6S0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Herc3A6H6S0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Herc3A6H6S0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.2■□□□□ 0.98
Herc3A6H6S0 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.2■□□□□ 0.98
Herc3A6H6S0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Herc3A6H6S0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Herc3A6H6S0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Herc3A6H6S0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Herc3A6H6S0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Herc3A6H6S0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Herc3A6H6S0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.19■□□□□ 0.98
Herc3A6H6S0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Herc3A6H6S0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Herc3A6H6S0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Herc3A6H6S0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Herc3A6H6S0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Herc3A6H6S0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.19■□□□□ 0.98
Herc3A6H6S0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Herc3A6H6S0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Herc3A6H6S0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Herc3A6H6S0 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.18■□□□□ 0.98
Herc3A6H6S0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Herc3A6H6S0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.18■□□□□ 0.98
Herc3A6H6S0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.18■□□□□ 0.98
Herc3A6H6S0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Herc3A6H6S0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Herc3A6H6S0 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.18■□□□□ 0.98
Herc3A6H6S0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Herc3A6H6S0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Herc3A6H6S0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Herc3A6H6S0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Herc3A6H6S0 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Herc3A6H6S0 Gm26833-201ENSMUST00000180899 440 ntBASIC21.17■□□□□ 0.98
Herc3A6H6S0 Gm43017-201ENSMUST00000198296 752 ntBASIC21.17■□□□□ 0.98
Herc3A6H6S0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.17■□□□□ 0.98
Herc3A6H6S0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Herc3A6H6S0 BC021767-201ENSMUST00000126387 1716 ntBASIC21.17■□□□□ 0.98
Herc3A6H6S0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Herc3A6H6S0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.17■□□□□ 0.98
Herc3A6H6S0 Golph3-205ENSMUST00000228671 2842 ntBASIC21.17■□□□□ 0.98
Herc3A6H6S0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Herc3A6H6S0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Herc3A6H6S0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Herc3A6H6S0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms