Protein–RNA interactions for Protein: A1L3P4

Slc9a6, Sodium/hydrogen exchanger, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a6A1L3P4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc9a6A1L3P4 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc9a6A1L3P4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc9a6A1L3P4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc9a6A1L3P4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Slc9a6A1L3P4 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc9a6A1L3P4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc9a6A1L3P4 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc9a6A1L3P4 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Slc9a6A1L3P4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc9a6A1L3P4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc9a6A1L3P4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Slc9a6A1L3P4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc9a6A1L3P4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc9a6A1L3P4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc9a6A1L3P4 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.01■□□□□ 0.47
Slc9a6A1L3P4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc9a6A1L3P4 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc9a6A1L3P4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Slc9a6A1L3P4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc9a6A1L3P4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Slc9a6A1L3P4 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18■□□□□ 0.47
Slc9a6A1L3P4 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18■□□□□ 0.47
Slc9a6A1L3P4 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc9a6A1L3P4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc9a6A1L3P4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18■□□□□ 0.47
Slc9a6A1L3P4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc9a6A1L3P4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18■□□□□ 0.47
Slc9a6A1L3P4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc9a6A1L3P4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Slc9a6A1L3P4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc9a6A1L3P4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc9a6A1L3P4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Slc9a6A1L3P4 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc9a6A1L3P4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Slc9a6A1L3P4 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.99■□□□□ 0.47
Slc9a6A1L3P4 Serp2-204ENSMUST00000228055 705 ntBASIC17.99■□□□□ 0.47
Slc9a6A1L3P4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc9a6A1L3P4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Slc9a6A1L3P4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc9a6A1L3P4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc9a6A1L3P4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.99■□□□□ 0.47
Slc9a6A1L3P4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc9a6A1L3P4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc9a6A1L3P4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Slc9a6A1L3P4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc9a6A1L3P4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.98■□□□□ 0.47
Slc9a6A1L3P4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc9a6A1L3P4 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc9a6A1L3P4 Gm8493-201ENSMUST00000196881 489 ntBASIC17.98■□□□□ 0.47
Slc9a6A1L3P4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc9a6A1L3P4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc9a6A1L3P4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
Slc9a6A1L3P4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Slc9a6A1L3P4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Slc9a6A1L3P4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc9a6A1L3P4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc9a6A1L3P4 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc9a6A1L3P4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Slc9a6A1L3P4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.97■□□□□ 0.47
Slc9a6A1L3P4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc9a6A1L3P4 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.97■□□□□ 0.47
Slc9a6A1L3P4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc9a6A1L3P4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Slc9a6A1L3P4 Gm45417-201ENSMUST00000209533 758 ntBASIC17.97■□□□□ 0.47
Slc9a6A1L3P4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc9a6A1L3P4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Slc9a6A1L3P4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Slc9a6A1L3P4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Slc9a6A1L3P4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc9a6A1L3P4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Slc9a6A1L3P4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc9a6A1L3P4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Slc9a6A1L3P4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc9a6A1L3P4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc9a6A1L3P4 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.96■□□□□ 0.47
Slc9a6A1L3P4 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.96■□□□□ 0.47
Slc9a6A1L3P4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Slc9a6A1L3P4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc9a6A1L3P4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Slc9a6A1L3P4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Slc9a6A1L3P4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc9a6A1L3P4 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.95■□□□□ 0.46
Slc9a6A1L3P4 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.95■□□□□ 0.46
Slc9a6A1L3P4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc9a6A1L3P4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Slc9a6A1L3P4 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.95■□□□□ 0.46
Slc9a6A1L3P4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Slc9a6A1L3P4 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc9a6A1L3P4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc9a6A1L3P4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc9a6A1L3P4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc9a6A1L3P4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc9a6A1L3P4 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc9a6A1L3P4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Slc9a6A1L3P4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Slc9a6A1L3P4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Slc9a6A1L3P4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc9a6A1L3P4 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Slc9a6A1L3P4 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms