Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Trav12-1A0N8R1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav12-1A0N8R1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.02■□□□□ 0.16
Trav12-1A0N8R1 Serp2-204ENSMUST00000228055 705 ntBASIC16.02■□□□□ 0.16
Trav12-1A0N8R1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav12-1A0N8R1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav12-1A0N8R1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav12-1A0N8R1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav12-1A0N8R1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12-1A0N8R1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Trav12-1A0N8R1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12-1A0N8R1 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.01■□□□□ 0.15
Trav12-1A0N8R1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav12-1A0N8R1 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.01■□□□□ 0.15
Trav12-1A0N8R1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trav12-1A0N8R1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12-1A0N8R1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trav12-1A0N8R1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12-1A0N8R1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav12-1A0N8R1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav12-1A0N8R1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav12-1A0N8R1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav12-1A0N8R1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav12-1A0N8R1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16■□□□□ 0.15
Trav12-1A0N8R1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16■□□□□ 0.15
Trav12-1A0N8R1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trav12-1A0N8R1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav12-1A0N8R1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav12-1A0N8R1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav12-1A0N8R1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav12-1A0N8R1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav12-1A0N8R1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav12-1A0N8R1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav12-1A0N8R1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav12-1A0N8R1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav12-1A0N8R1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav12-1A0N8R1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav12-1A0N8R1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav12-1A0N8R1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.99■□□□□ 0.15
Trav12-1A0N8R1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav12-1A0N8R1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav12-1A0N8R1 Gm45102-201ENSMUST00000207427 857 ntBASIC15.99■□□□□ 0.15
Trav12-1A0N8R1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav12-1A0N8R1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav12-1A0N8R1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav12-1A0N8R1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav12-1A0N8R1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trav12-1A0N8R1 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.98■□□□□ 0.15
Trav12-1A0N8R1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav12-1A0N8R1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC15.98■□□□□ 0.15
Trav12-1A0N8R1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav12-1A0N8R1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC15.98■□□□□ 0.15
Trav12-1A0N8R1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav12-1A0N8R1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav12-1A0N8R1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Trav12-1A0N8R1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.98■□□□□ 0.15
Trav12-1A0N8R1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav12-1A0N8R1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trav12-1A0N8R1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav12-1A0N8R1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav12-1A0N8R1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Trav12-1A0N8R1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav12-1A0N8R1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trav12-1A0N8R1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav12-1A0N8R1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav12-1A0N8R1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav12-1A0N8R1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav12-1A0N8R1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav12-1A0N8R1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav12-1A0N8R1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav12-1A0N8R1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav12-1A0N8R1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav12-1A0N8R1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav12-1A0N8R1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav12-1A0N8R1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav12-1A0N8R1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
Trav12-1A0N8R1 Golgb1-201ENSMUST00000023534 498 ntBASIC15.96■□□□□ 0.15
Trav12-1A0N8R1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav12-1A0N8R1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav12-1A0N8R1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav12-1A0N8R1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
Trav12-1A0N8R1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav12-1A0N8R1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Trav12-1A0N8R1 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.95■□□□□ 0.14
Trav12-1A0N8R1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Trav12-1A0N8R1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
Trav12-1A0N8R1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav12-1A0N8R1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav12-1A0N8R1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.95■□□□□ 0.14
Trav12-1A0N8R1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trav12-1A0N8R1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav12-1A0N8R1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav12-1A0N8R1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav12-1A0N8R1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav12-1A0N8R1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav12-1A0N8R1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav12-1A0N8R1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav12-1A0N8R1 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav12-1A0N8R1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav12-1A0N8R1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms