Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Gm43759-201ENSMUST00000196925 1261 ntBASIC15.45■□□□□ 0.06
Trav12d-1A0N8R0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.45■□□□□ 0.06
Trav12d-1A0N8R0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav12d-1A0N8R0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav12d-1A0N8R0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav12d-1A0N8R0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav12d-1A0N8R0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav12d-1A0N8R0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trav12d-1A0N8R0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav12d-1A0N8R0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav12d-1A0N8R0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav12d-1A0N8R0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav12d-1A0N8R0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav12d-1A0N8R0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav12d-1A0N8R0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav12d-1A0N8R0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav12d-1A0N8R0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav12d-1A0N8R0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav12d-1A0N8R0 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.44■□□□□ 0.06
Trav12d-1A0N8R0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav12d-1A0N8R0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav12d-1A0N8R0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav12d-1A0N8R0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trav12d-1A0N8R0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trav12d-1A0N8R0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Trav12d-1A0N8R0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav12d-1A0N8R0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav12d-1A0N8R0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav12d-1A0N8R0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav12d-1A0N8R0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav12d-1A0N8R0 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.43■□□□□ 0.06
Trav12d-1A0N8R0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav12d-1A0N8R0 Gm15820-201ENSMUST00000201566 728 ntBASIC15.43■□□□□ 0.06
Trav12d-1A0N8R0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav12d-1A0N8R0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav12d-1A0N8R0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav12d-1A0N8R0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav12d-1A0N8R0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav12d-1A0N8R0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav12d-1A0N8R0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav12d-1A0N8R0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav12d-1A0N8R0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav12d-1A0N8R0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12d-1A0N8R0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav12d-1A0N8R0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12d-1A0N8R0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12d-1A0N8R0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12d-1A0N8R0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12d-1A0N8R0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12d-1A0N8R0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12d-1A0N8R0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12d-1A0N8R0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12d-1A0N8R0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12d-1A0N8R0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12d-1A0N8R0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12d-1A0N8R0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12d-1A0N8R0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12d-1A0N8R0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Trav12d-1A0N8R0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12d-1A0N8R0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12d-1A0N8R0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12d-1A0N8R0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12d-1A0N8R0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trav12d-1A0N8R0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12d-1A0N8R0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12d-1A0N8R0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12d-1A0N8R0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12d-1A0N8R0 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.41■□□□□ 0.06
Trav12d-1A0N8R0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12d-1A0N8R0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12d-1A0N8R0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav12d-1A0N8R0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav12d-1A0N8R0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav12d-1A0N8R0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trav12d-1A0N8R0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav12d-1A0N8R0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Trav12d-1A0N8R0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav12d-1A0N8R0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav12d-1A0N8R0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav12d-1A0N8R0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav12d-1A0N8R0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav12d-1A0N8R0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav12d-1A0N8R0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav12d-1A0N8R0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav12d-1A0N8R0 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.4■□□□□ 0.06
Trav12d-1A0N8R0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Trav12d-1A0N8R0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav12d-1A0N8R0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav12d-1A0N8R0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav12d-1A0N8R0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav12d-1A0N8R0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav12d-1A0N8R0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.39■□□□□ 0.05
Trav12d-1A0N8R0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav12d-1A0N8R0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav12d-1A0N8R0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav12d-1A0N8R0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav12d-1A0N8R0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav12d-1A0N8R0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12d-1A0N8R0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12d-1A0N8R0 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms