Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Igkv1-88A0A140T8N1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv1-88A0A140T8N1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv1-88A0A140T8N1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Igkv1-88A0A140T8N1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv1-88A0A140T8N1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv1-88A0A140T8N1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv1-88A0A140T8N1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv1-88A0A140T8N1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC12.68□□□□□ -0.38
Igkv1-88A0A140T8N1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv1-88A0A140T8N1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv1-88A0A140T8N1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv1-88A0A140T8N1 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Igkv1-88A0A140T8N1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC12.68□□□□□ -0.38
Igkv1-88A0A140T8N1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv1-88A0A140T8N1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Igkv1-88A0A140T8N1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv1-88A0A140T8N1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv1-88A0A140T8N1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv1-88A0A140T8N1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv1-88A0A140T8N1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv1-88A0A140T8N1 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv1-88A0A140T8N1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC12.67□□□□□ -0.38
Igkv1-88A0A140T8N1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC12.67□□□□□ -0.38
Igkv1-88A0A140T8N1 Mir6236-201ENSMUST00000184437 123 ntBASIC12.67□□□□□ -0.38
Igkv1-88A0A140T8N1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
Igkv1-88A0A140T8N1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC12.67□□□□□ -0.38
Igkv1-88A0A140T8N1 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Igkv1-88A0A140T8N1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC12.67□□□□□ -0.38
Igkv1-88A0A140T8N1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv1-88A0A140T8N1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv1-88A0A140T8N1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv1-88A0A140T8N1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Igkv1-88A0A140T8N1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv1-88A0A140T8N1 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv1-88A0A140T8N1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv1-88A0A140T8N1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv1-88A0A140T8N1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv1-88A0A140T8N1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC12.66□□□□□ -0.38
Igkv1-88A0A140T8N1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Igkv1-88A0A140T8N1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Igkv1-88A0A140T8N1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv1-88A0A140T8N1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv1-88A0A140T8N1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv1-88A0A140T8N1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv1-88A0A140T8N1 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv1-88A0A140T8N1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv1-88A0A140T8N1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv1-88A0A140T8N1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv1-88A0A140T8N1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv1-88A0A140T8N1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv1-88A0A140T8N1 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv1-88A0A140T8N1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv1-88A0A140T8N1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv1-88A0A140T8N1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv1-88A0A140T8N1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv1-88A0A140T8N1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC12.65□□□□□ -0.38
Igkv1-88A0A140T8N1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv1-88A0A140T8N1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Igkv1-88A0A140T8N1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv1-88A0A140T8N1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv1-88A0A140T8N1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv1-88A0A140T8N1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Igkv1-88A0A140T8N1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv1-88A0A140T8N1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv1-88A0A140T8N1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Igkv1-88A0A140T8N1 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv1-88A0A140T8N1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv1-88A0A140T8N1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Igkv1-88A0A140T8N1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv1-88A0A140T8N1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv1-88A0A140T8N1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Igkv1-88A0A140T8N1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Igkv1-88A0A140T8N1 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv1-88A0A140T8N1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv1-88A0A140T8N1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv1-88A0A140T8N1 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv1-88A0A140T8N1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv1-88A0A140T8N1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC12.64□□□□□ -0.39
Igkv1-88A0A140T8N1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Igkv1-88A0A140T8N1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv1-88A0A140T8N1 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv1-88A0A140T8N1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Igkv1-88A0A140T8N1 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Igkv1-88A0A140T8N1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv1-88A0A140T8N1 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Igkv1-88A0A140T8N1 Gm5112-201ENSMUST00000204407 2368 ntBASIC12.64□□□□□ -0.39
Igkv1-88A0A140T8N1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv1-88A0A140T8N1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv1-88A0A140T8N1 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Igkv1-88A0A140T8N1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv1-88A0A140T8N1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv1-88A0A140T8N1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Igkv1-88A0A140T8N1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC12.63□□□□□ -0.39
Igkv1-88A0A140T8N1 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
Igkv1-88A0A140T8N1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv1-88A0A140T8N1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv1-88A0A140T8N1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Igkv1-88A0A140T8N1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Igkv1-88A0A140T8N1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms