Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb8A0A140LI48 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb8A0A140LI48 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb8A0A140LI48 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Pcdhgb8A0A140LI48 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.26■□□□□ 0.35
Pcdhgb8A0A140LI48 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb8A0A140LI48 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.26■□□□□ 0.35
Pcdhgb8A0A140LI48 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb8A0A140LI48 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Pcdhgb8A0A140LI48 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Pcdhgb8A0A140LI48 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb8A0A140LI48 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb8A0A140LI48 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb8A0A140LI48 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Pcdhgb8A0A140LI48 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb8A0A140LI48 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb8A0A140LI48 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb8A0A140LI48 Gm43530-201ENSMUST00000195920 274 ntBASIC17.25■□□□□ 0.35
Pcdhgb8A0A140LI48 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdhgb8A0A140LI48 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb8A0A140LI48 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Pcdhgb8A0A140LI48 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb8A0A140LI48 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb8A0A140LI48 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb8A0A140LI48 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb8A0A140LI48 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb8A0A140LI48 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb8A0A140LI48 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.25■□□□□ 0.35
Pcdhgb8A0A140LI48 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb8A0A140LI48 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb8A0A140LI48 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb8A0A140LI48 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb8A0A140LI48 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb8A0A140LI48 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhgb8A0A140LI48 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb8A0A140LI48 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.24■□□□□ 0.35
Pcdhgb8A0A140LI48 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb8A0A140LI48 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb8A0A140LI48 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb8A0A140LI48 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Pcdhgb8A0A140LI48 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb8A0A140LI48 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb8A0A140LI48 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Pcdhgb8A0A140LI48 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.23■□□□□ 0.35
Pcdhgb8A0A140LI48 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb8A0A140LI48 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb8A0A140LI48 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb8A0A140LI48 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Pcdhgb8A0A140LI48 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb8A0A140LI48 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.23■□□□□ 0.35
Pcdhgb8A0A140LI48 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Pcdhgb8A0A140LI48 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Pcdhgb8A0A140LI48 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb8A0A140LI48 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.23■□□□□ 0.35
Pcdhgb8A0A140LI48 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb8A0A140LI48 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb8A0A140LI48 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb8A0A140LI48 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb8A0A140LI48 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb8A0A140LI48 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.23■□□□□ 0.35
Pcdhgb8A0A140LI48 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb8A0A140LI48 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhgb8A0A140LI48 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb8A0A140LI48 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.22■□□□□ 0.35
Pcdhgb8A0A140LI48 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb8A0A140LI48 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb8A0A140LI48 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb8A0A140LI48 Serp2-204ENSMUST00000228055 705 ntBASIC17.22■□□□□ 0.35
Pcdhgb8A0A140LI48 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhgb8A0A140LI48 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Pcdhgb8A0A140LI48 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhgb8A0A140LI48 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.22■□□□□ 0.35
Pcdhgb8A0A140LI48 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb8A0A140LI48 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb8A0A140LI48 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb8A0A140LI48 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.21■□□□□ 0.35
Pcdhgb8A0A140LI48 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgb8A0A140LI48 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pcdhgb8A0A140LI48 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgb8A0A140LI48 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgb8A0A140LI48 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.21■□□□□ 0.35
Pcdhgb8A0A140LI48 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhgb8A0A140LI48 Gm43137-201ENSMUST00000198052 594 ntBASIC17.21■□□□□ 0.35
Pcdhgb8A0A140LI48 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgb8A0A140LI48 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgb8A0A140LI48 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdhgb8A0A140LI48 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhgb8A0A140LI48 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdhgb8A0A140LI48 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgb8A0A140LI48 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdhgb8A0A140LI48 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb8A0A140LI48 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb8A0A140LI48 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb8A0A140LI48 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb8A0A140LI48 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb8A0A140LI48 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb8A0A140LI48 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Pcdhgb8A0A140LI48 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.2■□□□□ 0.34
Pcdhgb8A0A140LI48 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb8A0A140LI48 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms