Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv29A0A0G2LB96 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv29A0A0G2LB96 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv29A0A0G2LB96 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv29A0A0G2LB96 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trbv29A0A0G2LB96 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv29A0A0G2LB96 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trbv29A0A0G2LB96 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv29A0A0G2LB96 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv29A0A0G2LB96 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv29A0A0G2LB96 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trbv29A0A0G2LB96 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv29A0A0G2LB96 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv29A0A0G2LB96 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv29A0A0G2LB96 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Trbv29A0A0G2LB96 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trbv29A0A0G2LB96 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv29A0A0G2LB96 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv29A0A0G2LB96 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trbv29A0A0G2LB96 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv29A0A0G2LB96 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv29A0A0G2LB96 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.92■□□□□ 0.14
Trbv29A0A0G2LB96 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.92■□□□□ 0.14
Trbv29A0A0G2LB96 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv29A0A0G2LB96 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv29A0A0G2LB96 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv29A0A0G2LB96 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC15.92■□□□□ 0.14
Trbv29A0A0G2LB96 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC15.92■□□□□ 0.14
Trbv29A0A0G2LB96 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv29A0A0G2LB96 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.92■□□□□ 0.14
Trbv29A0A0G2LB96 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv29A0A0G2LB96 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trbv29A0A0G2LB96 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv29A0A0G2LB96 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv29A0A0G2LB96 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.92■□□□□ 0.14
Trbv29A0A0G2LB96 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv29A0A0G2LB96 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv29A0A0G2LB96 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv29A0A0G2LB96 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv29A0A0G2LB96 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv29A0A0G2LB96 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.91■□□□□ 0.14
Trbv29A0A0G2LB96 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv29A0A0G2LB96 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv29A0A0G2LB96 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv29A0A0G2LB96 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv29A0A0G2LB96 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv29A0A0G2LB96 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv29A0A0G2LB96 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv29A0A0G2LB96 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv29A0A0G2LB96 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv29A0A0G2LB96 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv29A0A0G2LB96 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv29A0A0G2LB96 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv29A0A0G2LB96 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv29A0A0G2LB96 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv29A0A0G2LB96 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Trbv29A0A0G2LB96 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv29A0A0G2LB96 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv29A0A0G2LB96 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv29A0A0G2LB96 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv29A0A0G2LB96 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv29A0A0G2LB96 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv29A0A0G2LB96 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv29A0A0G2LB96 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv29A0A0G2LB96 Gm9959-201ENSMUST00000068277 390 ntBASIC15.9■□□□□ 0.14
Trbv29A0A0G2LB96 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv29A0A0G2LB96 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.89■□□□□ 0.14
Trbv29A0A0G2LB96 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trbv29A0A0G2LB96 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv29A0A0G2LB96 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv29A0A0G2LB96 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC15.89■□□□□ 0.13
Trbv29A0A0G2LB96 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trbv29A0A0G2LB96 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv29A0A0G2LB96 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv29A0A0G2LB96 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv29A0A0G2LB96 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv29A0A0G2LB96 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv29A0A0G2LB96 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Trbv29A0A0G2LB96 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.89■□□□□ 0.13
Trbv29A0A0G2LB96 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv29A0A0G2LB96 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv29A0A0G2LB96 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Trbv29A0A0G2LB96 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC15.88■□□□□ 0.13
Trbv29A0A0G2LB96 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.88■□□□□ 0.13
Trbv29A0A0G2LB96 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.88■□□□□ 0.13
Trbv29A0A0G2LB96 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
Trbv29A0A0G2LB96 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.88■□□□□ 0.13
Trbv29A0A0G2LB96 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv29A0A0G2LB96 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.88■□□□□ 0.13
Trbv29A0A0G2LB96 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv29A0A0G2LB96 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trbv29A0A0G2LB96 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Trbv29A0A0G2LB96 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv29A0A0G2LB96 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv29A0A0G2LB96 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv29A0A0G2LB96 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Trbv29A0A0G2LB96 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv29A0A0G2LB96 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv29A0A0G2LB96 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Trbv29A0A0G2LB96 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms