Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13n-4A0A0G2JG01 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13n-4A0A0G2JG01 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13n-4A0A0G2JG01 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trav13n-4A0A0G2JG01 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13n-4A0A0G2JG01 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13n-4A0A0G2JG01 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13n-4A0A0G2JG01 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13n-4A0A0G2JG01 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trav13n-4A0A0G2JG01 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.52■□□□□ 0.08
Trav13n-4A0A0G2JG01 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC15.52■□□□□ 0.08
Trav13n-4A0A0G2JG01 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13n-4A0A0G2JG01 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13n-4A0A0G2JG01 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav13n-4A0A0G2JG01 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav13n-4A0A0G2JG01 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13n-4A0A0G2JG01 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13n-4A0A0G2JG01 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13n-4A0A0G2JG01 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13n-4A0A0G2JG01 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav13n-4A0A0G2JG01 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.51■□□□□ 0.07
Trav13n-4A0A0G2JG01 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13n-4A0A0G2JG01 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13n-4A0A0G2JG01 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13n-4A0A0G2JG01 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13n-4A0A0G2JG01 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13n-4A0A0G2JG01 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13n-4A0A0G2JG01 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13n-4A0A0G2JG01 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trav13n-4A0A0G2JG01 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13n-4A0A0G2JG01 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC15.51■□□□□ 0.07
Trav13n-4A0A0G2JG01 Gm43530-201ENSMUST00000195920 274 ntBASIC15.51■□□□□ 0.07
Trav13n-4A0A0G2JG01 Gm43060-201ENSMUST00000200621 289 ntBASIC15.51■□□□□ 0.07
Trav13n-4A0A0G2JG01 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13n-4A0A0G2JG01 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13n-4A0A0G2JG01 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Trav13n-4A0A0G2JG01 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13n-4A0A0G2JG01 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13n-4A0A0G2JG01 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13n-4A0A0G2JG01 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13n-4A0A0G2JG01 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13n-4A0A0G2JG01 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13n-4A0A0G2JG01 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13n-4A0A0G2JG01 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13n-4A0A0G2JG01 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Trav13n-4A0A0G2JG01 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13n-4A0A0G2JG01 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.49■□□□□ 0.07
Trav13n-4A0A0G2JG01 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13n-4A0A0G2JG01 Spcs1-204ENSMUST00000226782 949 ntBASIC15.49■□□□□ 0.07
Trav13n-4A0A0G2JG01 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13n-4A0A0G2JG01 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.49■□□□□ 0.07
Trav13n-4A0A0G2JG01 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trav13n-4A0A0G2JG01 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
Trav13n-4A0A0G2JG01 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13n-4A0A0G2JG01 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13n-4A0A0G2JG01 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13n-4A0A0G2JG01 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13n-4A0A0G2JG01 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13n-4A0A0G2JG01 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13n-4A0A0G2JG01 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13n-4A0A0G2JG01 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13n-4A0A0G2JG01 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13n-4A0A0G2JG01 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13n-4A0A0G2JG01 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13n-4A0A0G2JG01 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.48■□□□□ 0.07
Trav13n-4A0A0G2JG01 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trav13n-4A0A0G2JG01 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13n-4A0A0G2JG01 Gm42569-201ENSMUST00000200539 472 ntBASIC15.48■□□□□ 0.07
Trav13n-4A0A0G2JG01 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.48■□□□□ 0.07
Trav13n-4A0A0G2JG01 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13n-4A0A0G2JG01 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
Trav13n-4A0A0G2JG01 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13n-4A0A0G2JG01 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13n-4A0A0G2JG01 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13n-4A0A0G2JG01 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13n-4A0A0G2JG01 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.48■□□□□ 0.07
Trav13n-4A0A0G2JG01 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trav13n-4A0A0G2JG01 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13n-4A0A0G2JG01 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13n-4A0A0G2JG01 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13n-4A0A0G2JG01 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13n-4A0A0G2JG01 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13n-4A0A0G2JG01 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trav13n-4A0A0G2JG01 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav13n-4A0A0G2JG01 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13n-4A0A0G2JG01 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trav13n-4A0A0G2JG01 Gm40848-201ENSMUST00000221998 324 ntBASIC15.47■□□□□ 0.07
Trav13n-4A0A0G2JG01 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13n-4A0A0G2JG01 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Trav13n-4A0A0G2JG01 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.47■□□□□ 0.07
Trav13n-4A0A0G2JG01 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Trav13n-4A0A0G2JG01 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav13n-4A0A0G2JG01 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13n-4A0A0G2JG01 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trav13n-4A0A0G2JG01 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13n-4A0A0G2JG01 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13n-4A0A0G2JG01 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.46■□□□□ 0.07
Trav13n-4A0A0G2JG01 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.46■□□□□ 0.07
Trav13n-4A0A0G2JG01 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
Trav13n-4A0A0G2JG01 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms