Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 AC157822.2-201ENSMUST00000200291 70 ntBASIC13.87□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-1A0A0G2JEU8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC13.87□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-1A0A0G2JEU8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.85□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC13.85□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC13.85□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Trav13n-1A0A0G2JEU8 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
Trav13n-1A0A0G2JEU8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC13.84□□□□□ -0.19
Trav13n-1A0A0G2JEU8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC13.83□□□□□ -0.19
Trav13n-1A0A0G2JEU8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC13.83□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13n-1A0A0G2JEU8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC13.82□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Gm10129-202ENSMUST00000193100 1316 ntBASIC13.82□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms