Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.27□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.26□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.26□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.26□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.26□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Gm5112-201ENSMUST00000204407 2368 ntBASIC14.26□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Mir6236-201ENSMUST00000184437 123 ntBASIC14.25□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.25□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC14.25□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.25□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.25□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-1A0A0B4J1P8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
Trbv13-1A0A0B4J1P8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC14.23□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC14.23□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14.23□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Gm43060-201ENSMUST00000200621 289 ntBASIC14.23□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.23□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Golph3-205ENSMUST00000228671 2842 ntBASIC14.22□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trbv13-1A0A0B4J1P8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Gm40848-201ENSMUST00000221998 324 ntBASIC14.22□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms