Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav19A0A0B4J1K4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav19A0A0B4J1K4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav19A0A0B4J1K4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav19A0A0B4J1K4 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav19A0A0B4J1K4 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav19A0A0B4J1K4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav19A0A0B4J1K4 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav19A0A0B4J1K4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav19A0A0B4J1K4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav19A0A0B4J1K4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav19A0A0B4J1K4 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav19A0A0B4J1K4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav19A0A0B4J1K4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav19A0A0B4J1K4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav19A0A0B4J1K4 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav19A0A0B4J1K4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav19A0A0B4J1K4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav19A0A0B4J1K4 Gm18755-201ENSMUST00000218030 1099 ntBASIC14.35□□□□□ -0.11
Trav19A0A0B4J1K4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav19A0A0B4J1K4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav19A0A0B4J1K4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav19A0A0B4J1K4 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav19A0A0B4J1K4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav19A0A0B4J1K4 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Trav19A0A0B4J1K4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav19A0A0B4J1K4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav19A0A0B4J1K4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav19A0A0B4J1K4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav19A0A0B4J1K4 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.34□□□□□ -0.11
Trav19A0A0B4J1K4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav19A0A0B4J1K4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav19A0A0B4J1K4 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav19A0A0B4J1K4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trav19A0A0B4J1K4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav19A0A0B4J1K4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav19A0A0B4J1K4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav19A0A0B4J1K4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav19A0A0B4J1K4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav19A0A0B4J1K4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav19A0A0B4J1K4 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav19A0A0B4J1K4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav19A0A0B4J1K4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC14.33□□□□□ -0.12
Trav19A0A0B4J1K4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav19A0A0B4J1K4 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav19A0A0B4J1K4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Trav19A0A0B4J1K4 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav19A0A0B4J1K4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav19A0A0B4J1K4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav19A0A0B4J1K4 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav19A0A0B4J1K4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav19A0A0B4J1K4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav19A0A0B4J1K4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav19A0A0B4J1K4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav19A0A0B4J1K4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav19A0A0B4J1K4 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav19A0A0B4J1K4 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav19A0A0B4J1K4 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.32□□□□□ -0.12
Trav19A0A0B4J1K4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav19A0A0B4J1K4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.32□□□□□ -0.12
Trav19A0A0B4J1K4 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav19A0A0B4J1K4 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav19A0A0B4J1K4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav19A0A0B4J1K4 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.32□□□□□ -0.12
Trav19A0A0B4J1K4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav19A0A0B4J1K4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav19A0A0B4J1K4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav19A0A0B4J1K4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav19A0A0B4J1K4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav19A0A0B4J1K4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav19A0A0B4J1K4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav19A0A0B4J1K4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav19A0A0B4J1K4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav19A0A0B4J1K4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav19A0A0B4J1K4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav19A0A0B4J1K4 Gm45640-201ENSMUST00000210665 1896 ntBASIC14.31□□□□□ -0.12
Trav19A0A0B4J1K4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav19A0A0B4J1K4 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav19A0A0B4J1K4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.31□□□□□ -0.12
Trav19A0A0B4J1K4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav19A0A0B4J1K4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav19A0A0B4J1K4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav19A0A0B4J1K4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav19A0A0B4J1K4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Trav19A0A0B4J1K4 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav19A0A0B4J1K4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav19A0A0B4J1K4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav19A0A0B4J1K4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.31□□□□□ -0.12
Trav19A0A0B4J1K4 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC14.31□□□□□ -0.12
Trav19A0A0B4J1K4 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.31□□□□□ -0.12
Trav19A0A0B4J1K4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav19A0A0B4J1K4 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav19A0A0B4J1K4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav19A0A0B4J1K4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav19A0A0B4J1K4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav19A0A0B4J1K4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav19A0A0B4J1K4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav19A0A0B4J1K4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav19A0A0B4J1K4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav19A0A0B4J1K4 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms