Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv5A0A0B4J1G9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.46■□□□□ 0.06
Trbv5A0A0B4J1G9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
Trbv5A0A0B4J1G9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trbv5A0A0B4J1G9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trbv5A0A0B4J1G9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv5A0A0B4J1G9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv5A0A0B4J1G9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv5A0A0B4J1G9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv5A0A0B4J1G9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv5A0A0B4J1G9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv5A0A0B4J1G9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.45■□□□□ 0.06
Trbv5A0A0B4J1G9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trbv5A0A0B4J1G9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv5A0A0B4J1G9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv5A0A0B4J1G9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC15.45■□□□□ 0.06
Trbv5A0A0B4J1G9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.45■□□□□ 0.06
Trbv5A0A0B4J1G9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv5A0A0B4J1G9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv5A0A0B4J1G9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv5A0A0B4J1G9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv5A0A0B4J1G9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv5A0A0B4J1G9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trbv5A0A0B4J1G9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv5A0A0B4J1G9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv5A0A0B4J1G9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv5A0A0B4J1G9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv5A0A0B4J1G9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv5A0A0B4J1G9 Gm7332-201ENSMUST00000118351 454 ntBASIC15.44■□□□□ 0.06
Trbv5A0A0B4J1G9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC15.44■□□□□ 0.06
Trbv5A0A0B4J1G9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC15.44■□□□□ 0.06
Trbv5A0A0B4J1G9 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.44■□□□□ 0.06
Trbv5A0A0B4J1G9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trbv5A0A0B4J1G9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv5A0A0B4J1G9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv5A0A0B4J1G9 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.44■□□□□ 0.06
Trbv5A0A0B4J1G9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trbv5A0A0B4J1G9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv5A0A0B4J1G9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv5A0A0B4J1G9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv5A0A0B4J1G9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv5A0A0B4J1G9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv5A0A0B4J1G9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv5A0A0B4J1G9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC15.43■□□□□ 0.06
Trbv5A0A0B4J1G9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv5A0A0B4J1G9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trbv5A0A0B4J1G9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.43■□□□□ 0.06
Trbv5A0A0B4J1G9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv5A0A0B4J1G9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv5A0A0B4J1G9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv5A0A0B4J1G9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv5A0A0B4J1G9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv5A0A0B4J1G9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv5A0A0B4J1G9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv5A0A0B4J1G9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv5A0A0B4J1G9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Trbv5A0A0B4J1G9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv5A0A0B4J1G9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv5A0A0B4J1G9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv5A0A0B4J1G9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC15.42■□□□□ 0.06
Trbv5A0A0B4J1G9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv5A0A0B4J1G9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv5A0A0B4J1G9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv5A0A0B4J1G9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv5A0A0B4J1G9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trbv5A0A0B4J1G9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv5A0A0B4J1G9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv5A0A0B4J1G9 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.42■□□□□ 0.06
Trbv5A0A0B4J1G9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.41■□□□□ 0.06
Trbv5A0A0B4J1G9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv5A0A0B4J1G9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trbv5A0A0B4J1G9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv5A0A0B4J1G9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trbv5A0A0B4J1G9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv5A0A0B4J1G9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv5A0A0B4J1G9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trbv5A0A0B4J1G9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Trbv5A0A0B4J1G9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC15.41■□□□□ 0.06
Trbv5A0A0B4J1G9 Mir6236-201ENSMUST00000184437 123 ntBASIC15.41■□□□□ 0.06
Trbv5A0A0B4J1G9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trbv5A0A0B4J1G9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv5A0A0B4J1G9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv5A0A0B4J1G9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv5A0A0B4J1G9 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.41■□□□□ 0.06
Trbv5A0A0B4J1G9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv5A0A0B4J1G9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trbv5A0A0B4J1G9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv5A0A0B4J1G9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trbv5A0A0B4J1G9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv5A0A0B4J1G9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv5A0A0B4J1G9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv5A0A0B4J1G9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv5A0A0B4J1G9 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.4■□□□□ 0.06
Trbv5A0A0B4J1G9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv5A0A0B4J1G9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trbv5A0A0B4J1G9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.4■□□□□ 0.06
Trbv5A0A0B4J1G9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Trbv5A0A0B4J1G9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv5A0A0B4J1G9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC15.4■□□□□ 0.06
Trbv5A0A0B4J1G9 Mir6538-201ENSMUST00000183713 110 ntBASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 276.3 ms