Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.18■□□□□ 0.5
Sirpb1aA0A0A6YYP6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.17■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sirpb1aA0A0A6YYP6 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.16■□□□□ 0.5
Sirpb1aA0A0A6YYP6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sirpb1aA0A0A6YYP6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.15■□□□□ 0.5
Sirpb1aA0A0A6YYP6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.15■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.14■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sirpb1aA0A0A6YYP6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.14■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.13■□□□□ 0.49
Sirpb1aA0A0A6YYP6 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.13■□□□□ 0.49
Sirpb1aA0A0A6YYP6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.13■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Sirpb1aA0A0A6YYP6 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.12■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sirpb1aA0A0A6YYP6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.11■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.11■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.11■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sirpb1aA0A0A6YYP6 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.1■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms