Protein–RNA interactions for Protein: A0A0A6YYE5

Igkv4-78, Immunoglobulin kappa variable 4-78 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-78A0A0A6YYE5 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC13.6□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igkv4-78A0A0A6YYE5 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Igkv4-78A0A0A6YYE5 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC13.6□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC13.6□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Gm15820-201ENSMUST00000201566 728 ntBASIC13.59□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC13.59□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Igkv4-78A0A0A6YYE5 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC13.58□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Igkv4-78A0A0A6YYE5 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Gm42501-201ENSMUST00000200220 1026 ntBASIC13.57□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Gm7417-201ENSMUST00000192950 473 ntBASIC13.56□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Igkv4-78A0A0A6YYE5 AA386476-201ENSMUST00000098781 1665 ntBASIC13.56□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC13.56□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Igkv4-78A0A0A6YYE5 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC13.55□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Igkv4-78A0A0A6YYE5 AC126028.2-201ENSMUST00000228100 1833 ntBASIC13.55□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Igkv4-78A0A0A6YYE5 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms