Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.78■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv1-43A0A0A6YXN5 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.77■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ighv1-43A0A0A6YXN5 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.77■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.76■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.76■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.76■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv1-43A0A0A6YXN5 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.75■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Mir5133-201ENSMUST00000174955 77 ntBASIC17.75■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.75■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.75■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.75■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Gm6420-201ENSMUST00000193885 723 ntBASIC17.74■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv1-43A0A0A6YXN5 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Gm7290-201ENSMUST00000104990 617 ntBASIC17.73■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Gm12918-201ENSMUST00000120234 636 ntBASIC17.73■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Gm15710-201ENSMUST00000121821 636 ntBASIC17.73■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Gm5075-201ENSMUST00000196916 622 ntBASIC17.73■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.73■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.73■□□□□ 0.43
Ighv1-43A0A0A6YXN5 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.73■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.73■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.73■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.73■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.73■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.72■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.72■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.72■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ighv1-43A0A0A6YXN5 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-43A0A0A6YXN5 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.72■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.72■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.71■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms