Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.99■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.99■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.99■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.99■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Gm10812-201ENSMUST00000099864 546 ntBASIC15.99■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv3-4A0A0A6YXF1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.98■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.98■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.98■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.98■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Trmt13-210ENSMUST00000198454 880 ntBASIC15.98■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.98■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.98■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv3-4A0A0A6YXF1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.97■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv3-4A0A0A6YXF1 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv3-4A0A0A6YXF1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.97■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.96■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv3-4A0A0A6YXF1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Gm26524-201ENSMUST00000192339 390 ntBASIC15.96■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv3-4A0A0A6YXF1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC15.95■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.95■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.95■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.95■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Rab3c-203ENSMUST00000224180 967 ntBASIC15.95■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Ighv3-4A0A0A6YXF1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.94■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
Ighv3-4A0A0A6YXF1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.94■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv3-4A0A0A6YXF1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.93■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.93■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms