Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv23A0A0A6YWQ1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.46■□□□□ 0.23
Trbv23A0A0A6YWQ1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv23A0A0A6YWQ1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trbv23A0A0A6YWQ1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv23A0A0A6YWQ1 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.46■□□□□ 0.23
Trbv23A0A0A6YWQ1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv23A0A0A6YWQ1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv23A0A0A6YWQ1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv23A0A0A6YWQ1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv23A0A0A6YWQ1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Trbv23A0A0A6YWQ1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv23A0A0A6YWQ1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv23A0A0A6YWQ1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv23A0A0A6YWQ1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv23A0A0A6YWQ1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trbv23A0A0A6YWQ1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trbv23A0A0A6YWQ1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv23A0A0A6YWQ1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv23A0A0A6YWQ1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.45■□□□□ 0.22
Trbv23A0A0A6YWQ1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.45■□□□□ 0.22
Trbv23A0A0A6YWQ1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trbv23A0A0A6YWQ1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trbv23A0A0A6YWQ1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv23A0A0A6YWQ1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trbv23A0A0A6YWQ1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv23A0A0A6YWQ1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.45■□□□□ 0.22
Trbv23A0A0A6YWQ1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv23A0A0A6YWQ1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv23A0A0A6YWQ1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv23A0A0A6YWQ1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv23A0A0A6YWQ1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv23A0A0A6YWQ1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv23A0A0A6YWQ1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv23A0A0A6YWQ1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv23A0A0A6YWQ1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv23A0A0A6YWQ1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.44■□□□□ 0.22
Trbv23A0A0A6YWQ1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv23A0A0A6YWQ1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.44■□□□□ 0.22
Trbv23A0A0A6YWQ1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Trbv23A0A0A6YWQ1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv23A0A0A6YWQ1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Trbv23A0A0A6YWQ1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Trbv23A0A0A6YWQ1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv23A0A0A6YWQ1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv23A0A0A6YWQ1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv23A0A0A6YWQ1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv23A0A0A6YWQ1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.44■□□□□ 0.22
Trbv23A0A0A6YWQ1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv23A0A0A6YWQ1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv23A0A0A6YWQ1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv23A0A0A6YWQ1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv23A0A0A6YWQ1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trbv23A0A0A6YWQ1 Gm7143-201ENSMUST00000222811 859 ntBASIC16.43■□□□□ 0.22
Trbv23A0A0A6YWQ1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv23A0A0A6YWQ1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trbv23A0A0A6YWQ1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv23A0A0A6YWQ1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.43■□□□□ 0.22
Trbv23A0A0A6YWQ1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv23A0A0A6YWQ1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv23A0A0A6YWQ1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.42■□□□□ 0.22
Trbv23A0A0A6YWQ1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trbv23A0A0A6YWQ1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trbv23A0A0A6YWQ1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv23A0A0A6YWQ1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv23A0A0A6YWQ1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv23A0A0A6YWQ1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
Trbv23A0A0A6YWQ1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.42■□□□□ 0.22
Trbv23A0A0A6YWQ1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv23A0A0A6YWQ1 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv23A0A0A6YWQ1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv23A0A0A6YWQ1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv23A0A0A6YWQ1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trbv23A0A0A6YWQ1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.41■□□□□ 0.22
Trbv23A0A0A6YWQ1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv23A0A0A6YWQ1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv23A0A0A6YWQ1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.41■□□□□ 0.22
Trbv23A0A0A6YWQ1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv23A0A0A6YWQ1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv23A0A0A6YWQ1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv23A0A0A6YWQ1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv23A0A0A6YWQ1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv23A0A0A6YWQ1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv23A0A0A6YWQ1 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv23A0A0A6YWQ1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv23A0A0A6YWQ1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv23A0A0A6YWQ1 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.41■□□□□ 0.22
Trbv23A0A0A6YWQ1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trbv23A0A0A6YWQ1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv23A0A0A6YWQ1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv23A0A0A6YWQ1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv23A0A0A6YWQ1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv23A0A0A6YWQ1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv23A0A0A6YWQ1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv23A0A0A6YWQ1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv23A0A0A6YWQ1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.4■□□□□ 0.22
Trbv23A0A0A6YWQ1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.4■□□□□ 0.22
Trbv23A0A0A6YWQ1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.4■□□□□ 0.22
Trbv23A0A0A6YWQ1 Gm9870-201ENSMUST00000063874 645 ntBASIC16.4■□□□□ 0.22
Trbv23A0A0A6YWQ1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms