Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Gm10232-201ENSMUST00000089221 720 ntBASIC15.54■□□□□ 0.08
Trav6d-5A0A075B6B9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6d-5A0A075B6B9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6d-5A0A075B6B9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6d-5A0A075B6B9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6d-5A0A075B6B9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6d-5A0A075B6B9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6d-5A0A075B6B9 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.53■□□□□ 0.08
Trav6d-5A0A075B6B9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6d-5A0A075B6B9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6d-5A0A075B6B9 Etf1-202ENSMUST00000180351 108 ntBASIC15.53■□□□□ 0.08
Trav6d-5A0A075B6B9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC15.53■□□□□ 0.08
Trav6d-5A0A075B6B9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC15.53■□□□□ 0.08
Trav6d-5A0A075B6B9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav6d-5A0A075B6B9 Gm40881-201ENSMUST00000223397 166 ntBASIC15.53■□□□□ 0.08
Trav6d-5A0A075B6B9 Gm9870-201ENSMUST00000063874 645 ntBASIC15.53■□□□□ 0.08
Trav6d-5A0A075B6B9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6d-5A0A075B6B9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav6d-5A0A075B6B9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6d-5A0A075B6B9 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.53■□□□□ 0.08
Trav6d-5A0A075B6B9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6d-5A0A075B6B9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6d-5A0A075B6B9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6d-5A0A075B6B9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6d-5A0A075B6B9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trav6d-5A0A075B6B9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6d-5A0A075B6B9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6d-5A0A075B6B9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6d-5A0A075B6B9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6d-5A0A075B6B9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.52■□□□□ 0.08
Trav6d-5A0A075B6B9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC15.52■□□□□ 0.08
Trav6d-5A0A075B6B9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.52■□□□□ 0.08
Trav6d-5A0A075B6B9 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.52■□□□□ 0.08
Trav6d-5A0A075B6B9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6d-5A0A075B6B9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6d-5A0A075B6B9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6d-5A0A075B6B9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6d-5A0A075B6B9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6d-5A0A075B6B9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6d-5A0A075B6B9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6d-5A0A075B6B9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
Trav6d-5A0A075B6B9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6d-5A0A075B6B9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6d-5A0A075B6B9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6d-5A0A075B6B9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav6d-5A0A075B6B9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6d-5A0A075B6B9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav6d-5A0A075B6B9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6d-5A0A075B6B9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav6d-5A0A075B6B9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6d-5A0A075B6B9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC15.51■□□□□ 0.07
Trav6d-5A0A075B6B9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trav6d-5A0A075B6B9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6d-5A0A075B6B9 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.51■□□□□ 0.07
Trav6d-5A0A075B6B9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6d-5A0A075B6B9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6d-5A0A075B6B9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6d-5A0A075B6B9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav6d-5A0A075B6B9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6d-5A0A075B6B9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6d-5A0A075B6B9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6d-5A0A075B6B9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6d-5A0A075B6B9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6d-5A0A075B6B9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6d-5A0A075B6B9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav6d-5A0A075B6B9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6d-5A0A075B6B9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6d-5A0A075B6B9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6d-5A0A075B6B9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6d-5A0A075B6B9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav6d-5A0A075B6B9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-5A0A075B6B9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-5A0A075B6B9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-5A0A075B6B9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-5A0A075B6B9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-5A0A075B6B9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-5A0A075B6B9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav6d-5A0A075B6B9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-5A0A075B6B9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-5A0A075B6B9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-5A0A075B6B9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-5A0A075B6B9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Trav6d-5A0A075B6B9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-5A0A075B6B9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav6d-5A0A075B6B9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-5A0A075B6B9 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.48■□□□□ 0.07
Trav6d-5A0A075B6B9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trav6d-5A0A075B6B9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-5A0A075B6B9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-5A0A075B6B9 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.48■□□□□ 0.07
Trav6d-5A0A075B6B9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-5A0A075B6B9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav6d-5A0A075B6B9 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.48■□□□□ 0.07
Trav6d-5A0A075B6B9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-5A0A075B6B9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-5A0A075B6B9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-5A0A075B6B9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6d-5A0A075B6B9 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.47■□□□□ 0.07
Trav6d-5A0A075B6B9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6d-5A0A075B6B9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 105.2 ms