Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6n-6A0A075B6B2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6n-6A0A075B6B2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6n-6A0A075B6B2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6n-6A0A075B6B2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6n-6A0A075B6B2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6n-6A0A075B6B2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6n-6A0A075B6B2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6n-6A0A075B6B2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6n-6A0A075B6B2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav6n-6A0A075B6B2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6n-6A0A075B6B2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6n-6A0A075B6B2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6n-6A0A075B6B2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
Trav6n-6A0A075B6B2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trav6n-6A0A075B6B2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav6n-6A0A075B6B2 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.26□□□□□ -0.13
Trav6n-6A0A075B6B2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6n-6A0A075B6B2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6n-6A0A075B6B2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6n-6A0A075B6B2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6n-6A0A075B6B2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6n-6A0A075B6B2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trav6n-6A0A075B6B2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6n-6A0A075B6B2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav6n-6A0A075B6B2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6n-6A0A075B6B2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6n-6A0A075B6B2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6n-6A0A075B6B2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6n-6A0A075B6B2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav6n-6A0A075B6B2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav6n-6A0A075B6B2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC14.25□□□□□ -0.13
Trav6n-6A0A075B6B2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6n-6A0A075B6B2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trav6n-6A0A075B6B2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6n-6A0A075B6B2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6n-6A0A075B6B2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6n-6A0A075B6B2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6n-6A0A075B6B2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Trav6n-6A0A075B6B2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trav6n-6A0A075B6B2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6n-6A0A075B6B2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Trav6n-6A0A075B6B2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6n-6A0A075B6B2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6n-6A0A075B6B2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6n-6A0A075B6B2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6n-6A0A075B6B2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav6n-6A0A075B6B2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6n-6A0A075B6B2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6n-6A0A075B6B2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6n-6A0A075B6B2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6n-6A0A075B6B2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6n-6A0A075B6B2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6n-6A0A075B6B2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6n-6A0A075B6B2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6n-6A0A075B6B2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav6n-6A0A075B6B2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6n-6A0A075B6B2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav6n-6A0A075B6B2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trav6n-6A0A075B6B2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav6n-6A0A075B6B2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Trav6n-6A0A075B6B2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.23□□□□□ -0.13
Trav6n-6A0A075B6B2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav6n-6A0A075B6B2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6n-6A0A075B6B2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6n-6A0A075B6B2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav6n-6A0A075B6B2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav6n-6A0A075B6B2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6n-6A0A075B6B2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6n-6A0A075B6B2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6n-6A0A075B6B2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav6n-6A0A075B6B2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6n-6A0A075B6B2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6n-6A0A075B6B2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6n-6A0A075B6B2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6n-6A0A075B6B2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Trav6n-6A0A075B6B2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6n-6A0A075B6B2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6n-6A0A075B6B2 Gm7143-201ENSMUST00000222811 859 ntBASIC14.22□□□□□ -0.13
Trav6n-6A0A075B6B2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6n-6A0A075B6B2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6n-6A0A075B6B2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6n-6A0A075B6B2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6n-6A0A075B6B2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6n-6A0A075B6B2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC14.22□□□□□ -0.13
Trav6n-6A0A075B6B2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6n-6A0A075B6B2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6n-6A0A075B6B2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6n-6A0A075B6B2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6n-6A0A075B6B2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6n-6A0A075B6B2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6n-6A0A075B6B2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6n-6A0A075B6B2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trav6n-6A0A075B6B2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6n-6A0A075B6B2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav6n-6A0A075B6B2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC14.21□□□□□ -0.13
Trav6n-6A0A075B6B2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trav6n-6A0A075B6B2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Trav6n-6A0A075B6B2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6n-6A0A075B6B2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms