Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav5-4A0A075B652 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav5-4A0A075B652 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav5-4A0A075B652 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav5-4A0A075B652 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.96■□□□□ 0.15
Trav5-4A0A075B652 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav5-4A0A075B652 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav5-4A0A075B652 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav5-4A0A075B652 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav5-4A0A075B652 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav5-4A0A075B652 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav5-4A0A075B652 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav5-4A0A075B652 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.95■□□□□ 0.14
Trav5-4A0A075B652 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav5-4A0A075B652 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav5-4A0A075B652 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav5-4A0A075B652 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav5-4A0A075B652 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
Trav5-4A0A075B652 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav5-4A0A075B652 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav5-4A0A075B652 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav5-4A0A075B652 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav5-4A0A075B652 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav5-4A0A075B652 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav5-4A0A075B652 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav5-4A0A075B652 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav5-4A0A075B652 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav5-4A0A075B652 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav5-4A0A075B652 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav5-4A0A075B652 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav5-4A0A075B652 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Trav5-4A0A075B652 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav5-4A0A075B652 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav5-4A0A075B652 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav5-4A0A075B652 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav5-4A0A075B652 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav5-4A0A075B652 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav5-4A0A075B652 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav5-4A0A075B652 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav5-4A0A075B652 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav5-4A0A075B652 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.93■□□□□ 0.14
Trav5-4A0A075B652 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav5-4A0A075B652 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Trav5-4A0A075B652 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav5-4A0A075B652 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav5-4A0A075B652 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav5-4A0A075B652 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav5-4A0A075B652 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav5-4A0A075B652 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav5-4A0A075B652 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trav5-4A0A075B652 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav5-4A0A075B652 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.92■□□□□ 0.14
Trav5-4A0A075B652 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav5-4A0A075B652 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav5-4A0A075B652 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav5-4A0A075B652 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav5-4A0A075B652 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav5-4A0A075B652 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav5-4A0A075B652 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav5-4A0A075B652 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.92■□□□□ 0.14
Trav5-4A0A075B652 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav5-4A0A075B652 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav5-4A0A075B652 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav5-4A0A075B652 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav5-4A0A075B652 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
Trav5-4A0A075B652 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav5-4A0A075B652 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav5-4A0A075B652 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav5-4A0A075B652 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav5-4A0A075B652 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav5-4A0A075B652 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav5-4A0A075B652 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav5-4A0A075B652 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav5-4A0A075B652 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav5-4A0A075B652 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.91■□□□□ 0.14
Trav5-4A0A075B652 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav5-4A0A075B652 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav5-4A0A075B652 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Trav5-4A0A075B652 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav5-4A0A075B652 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav5-4A0A075B652 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Trav5-4A0A075B652 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trav5-4A0A075B652 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav5-4A0A075B652 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav5-4A0A075B652 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav5-4A0A075B652 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
Trav5-4A0A075B652 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav5-4A0A075B652 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav5-4A0A075B652 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav5-4A0A075B652 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav5-4A0A075B652 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.9■□□□□ 0.14
Trav5-4A0A075B652 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav5-4A0A075B652 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trav5-4A0A075B652 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav5-4A0A075B652 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav5-4A0A075B652 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trav5-4A0A075B652 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav5-4A0A075B652 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav5-4A0A075B652 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav5-4A0A075B652 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms