Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8-1A0A075B641 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8-1A0A075B641 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8-1A0A075B641 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8-1A0A075B641 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8-1A0A075B641 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8-1A0A075B641 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8-1A0A075B641 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8-1A0A075B641 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8-1A0A075B641 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8-1A0A075B641 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8-1A0A075B641 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8-1A0A075B641 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8-1A0A075B641 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.76□□□□□ -0.21
Trav8-1A0A075B641 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8-1A0A075B641 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav8-1A0A075B641 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8-1A0A075B641 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8-1A0A075B641 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8-1A0A075B641 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8-1A0A075B641 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8-1A0A075B641 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8-1A0A075B641 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8-1A0A075B641 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8-1A0A075B641 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8-1A0A075B641 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC13.76□□□□□ -0.21
Trav8-1A0A075B641 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8-1A0A075B641 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.76□□□□□ -0.21
Trav8-1A0A075B641 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8-1A0A075B641 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8-1A0A075B641 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8-1A0A075B641 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8-1A0A075B641 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8-1A0A075B641 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8-1A0A075B641 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8-1A0A075B641 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8-1A0A075B641 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8-1A0A075B641 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8-1A0A075B641 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8-1A0A075B641 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8-1A0A075B641 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8-1A0A075B641 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav8-1A0A075B641 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8-1A0A075B641 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8-1A0A075B641 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8-1A0A075B641 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8-1A0A075B641 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8-1A0A075B641 AC151971.4-201ENSMUST00000214717 704 ntBASIC13.75□□□□□ -0.21
Trav8-1A0A075B641 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8-1A0A075B641 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8-1A0A075B641 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Trav8-1A0A075B641 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav8-1A0A075B641 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8-1A0A075B641 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8-1A0A075B641 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8-1A0A075B641 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8-1A0A075B641 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8-1A0A075B641 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8-1A0A075B641 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8-1A0A075B641 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8-1A0A075B641 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav8-1A0A075B641 Gm44832-201ENSMUST00000208849 2303 ntBASIC13.74□□□□□ -0.21
Trav8-1A0A075B641 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8-1A0A075B641 Gm5540-201ENSMUST00000131852 1848 ntBASIC13.74□□□□□ -0.21
Trav8-1A0A075B641 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Trav8-1A0A075B641 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8-1A0A075B641 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8-1A0A075B641 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8-1A0A075B641 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8-1A0A075B641 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Trav8-1A0A075B641 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8-1A0A075B641 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8-1A0A075B641 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8-1A0A075B641 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8-1A0A075B641 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav8-1A0A075B641 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8-1A0A075B641 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav8-1A0A075B641 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8-1A0A075B641 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8-1A0A075B641 AC126028.2-201ENSMUST00000228100 1833 ntBASIC13.74□□□□□ -0.21
Trav8-1A0A075B641 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8-1A0A075B641 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8-1A0A075B641 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav8-1A0A075B641 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8-1A0A075B641 Gm6802-201ENSMUST00000167843 1983 ntBASIC13.73□□□□□ -0.21
Trav8-1A0A075B641 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav8-1A0A075B641 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8-1A0A075B641 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8-1A0A075B641 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8-1A0A075B641 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav8-1A0A075B641 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8-1A0A075B641 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8-1A0A075B641 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8-1A0A075B641 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav8-1A0A075B641 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8-1A0A075B641 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8-1A0A075B641 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8-1A0A075B641 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8-1A0A075B641 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8-1A0A075B641 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms