Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav16d-dv11A0A075B617 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav16d-dv11A0A075B617 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Trav16d-dv11A0A075B617 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trav16d-dv11A0A075B617 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav16d-dv11A0A075B617 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav16d-dv11A0A075B617 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav16d-dv11A0A075B617 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav16d-dv11A0A075B617 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trav16d-dv11A0A075B617 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav16d-dv11A0A075B617 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav16d-dv11A0A075B617 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC14.12□□□□□ -0.15
Trav16d-dv11A0A075B617 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav16d-dv11A0A075B617 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav16d-dv11A0A075B617 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trav16d-dv11A0A075B617 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16d-dv11A0A075B617 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16d-dv11A0A075B617 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16d-dv11A0A075B617 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16d-dv11A0A075B617 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16d-dv11A0A075B617 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16d-dv11A0A075B617 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Trav16d-dv11A0A075B617 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16d-dv11A0A075B617 Gm27502-201ENSMUST00000183495 199 ntBASIC14.11□□□□□ -0.15
Trav16d-dv11A0A075B617 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16d-dv11A0A075B617 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16d-dv11A0A075B617 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16d-dv11A0A075B617 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16d-dv11A0A075B617 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav16d-dv11A0A075B617 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16d-dv11A0A075B617 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16d-dv11A0A075B617 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16d-dv11A0A075B617 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16d-dv11A0A075B617 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trav16d-dv11A0A075B617 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16d-dv11A0A075B617 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16d-dv11A0A075B617 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16d-dv11A0A075B617 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav16d-dv11A0A075B617 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16d-dv11A0A075B617 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16d-dv11A0A075B617 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16d-dv11A0A075B617 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Trav16d-dv11A0A075B617 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16d-dv11A0A075B617 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16d-dv11A0A075B617 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16d-dv11A0A075B617 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16d-dv11A0A075B617 Gm7332-201ENSMUST00000118351 454 ntBASIC14.1□□□□□ -0.15
Trav16d-dv11A0A075B617 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16d-dv11A0A075B617 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC14.1□□□□□ -0.15
Trav16d-dv11A0A075B617 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC14.1□□□□□ -0.15
Trav16d-dv11A0A075B617 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16d-dv11A0A075B617 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16d-dv11A0A075B617 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16d-dv11A0A075B617 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16d-dv11A0A075B617 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16d-dv11A0A075B617 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16d-dv11A0A075B617 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16d-dv11A0A075B617 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16d-dv11A0A075B617 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16d-dv11A0A075B617 Gm10620-201ENSMUST00000098379 1332 ntBASIC14.1□□□□□ -0.15
Trav16d-dv11A0A075B617 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16d-dv11A0A075B617 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16d-dv11A0A075B617 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16d-dv11A0A075B617 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16d-dv11A0A075B617 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16d-dv11A0A075B617 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16d-dv11A0A075B617 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16d-dv11A0A075B617 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trav16d-dv11A0A075B617 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16d-dv11A0A075B617 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16d-dv11A0A075B617 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16d-dv11A0A075B617 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16d-dv11A0A075B617 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.09□□□□□ -0.15
Trav16d-dv11A0A075B617 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.09□□□□□ -0.15
Trav16d-dv11A0A075B617 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav16d-dv11A0A075B617 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.08□□□□□ -0.16
Trav16d-dv11A0A075B617 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav16d-dv11A0A075B617 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav16d-dv11A0A075B617 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav16d-dv11A0A075B617 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trav16d-dv11A0A075B617 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC14.08□□□□□ -0.16
Trav16d-dv11A0A075B617 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav16d-dv11A0A075B617 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav16d-dv11A0A075B617 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav16d-dv11A0A075B617 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav16d-dv11A0A075B617 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.08□□□□□ -0.16
Trav16d-dv11A0A075B617 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav16d-dv11A0A075B617 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav16d-dv11A0A075B617 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16d-dv11A0A075B617 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav16d-dv11A0A075B617 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav16d-dv11A0A075B617 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16d-dv11A0A075B617 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16d-dv11A0A075B617 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16d-dv11A0A075B617 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16d-dv11A0A075B617 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16d-dv11A0A075B617 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav16d-dv11A0A075B617 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16d-dv11A0A075B617 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16d-dv11A0A075B617 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms