Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-1A0A075B606 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-1A0A075B606 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-1A0A075B606 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-1A0A075B606 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-1A0A075B606 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-1A0A075B606 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav13d-1A0A075B606 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-1A0A075B606 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-1A0A075B606 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC14.03□□□□□ -0.16
Trav13d-1A0A075B606 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.03□□□□□ -0.16
Trav13d-1A0A075B606 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-1A0A075B606 Gm42778-201ENSMUST00000199644 553 ntBASIC14.03□□□□□ -0.16
Trav13d-1A0A075B606 Gm18671-201ENSMUST00000214826 683 ntBASIC14.03□□□□□ -0.16
Trav13d-1A0A075B606 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.03□□□□□ -0.16
Trav13d-1A0A075B606 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-1A0A075B606 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-1A0A075B606 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-1A0A075B606 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-1A0A075B606 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav13d-1A0A075B606 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav13d-1A0A075B606 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-1A0A075B606 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Trav13d-1A0A075B606 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-1A0A075B606 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav13d-1A0A075B606 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav13d-1A0A075B606 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13d-1A0A075B606 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13d-1A0A075B606 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13d-1A0A075B606 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.02□□□□□ -0.16
Trav13d-1A0A075B606 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13d-1A0A075B606 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Trav13d-1A0A075B606 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav13d-1A0A075B606 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav13d-1A0A075B606 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav13d-1A0A075B606 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav13d-1A0A075B606 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav13d-1A0A075B606 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trav13d-1A0A075B606 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trav13d-1A0A075B606 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Trav13d-1A0A075B606 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav13d-1A0A075B606 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.01□□□□□ -0.17
Trav13d-1A0A075B606 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav13d-1A0A075B606 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trav13d-1A0A075B606 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav13d-1A0A075B606 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13d-1A0A075B606 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13d-1A0A075B606 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13d-1A0A075B606 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav13d-1A0A075B606 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13d-1A0A075B606 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13d-1A0A075B606 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Trav13d-1A0A075B606 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13d-1A0A075B606 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13d-1A0A075B606 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav13d-1A0A075B606 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13d-1A0A075B606 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13d-1A0A075B606 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14□□□□□ -0.17
Trav13d-1A0A075B606 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13d-1A0A075B606 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13d-1A0A075B606 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav13d-1A0A075B606 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13d-1A0A075B606 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13d-1A0A075B606 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13d-1A0A075B606 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13d-1A0A075B606 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav13d-1A0A075B606 Gm9988-201ENSMUST00000069786 435 ntBASIC14□□□□□ -0.17
Trav13d-1A0A075B606 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC14□□□□□ -0.17
Trav13d-1A0A075B606 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav13d-1A0A075B606 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13d-1A0A075B606 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14□□□□□ -0.17
Trav13d-1A0A075B606 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13d-1A0A075B606 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13d-1A0A075B606 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13d-1A0A075B606 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav13d-1A0A075B606 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13d-1A0A075B606 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav13d-1A0A075B606 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14□□□□□ -0.17
Trav13d-1A0A075B606 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13d-1A0A075B606 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-1A0A075B606 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-1A0A075B606 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-1A0A075B606 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-1A0A075B606 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav13d-1A0A075B606 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-1A0A075B606 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-1A0A075B606 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-1A0A075B606 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-1A0A075B606 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC13.99□□□□□ -0.17
Trav13d-1A0A075B606 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-1A0A075B606 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-1A0A075B606 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-1A0A075B606 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-1A0A075B606 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav13d-1A0A075B606 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-1A0A075B606 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-1A0A075B606 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-1A0A075B606 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-1A0A075B606 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav13d-1A0A075B606 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms