Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7n-5A0A075B604 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.76■□□□□ 0.11
Trav7n-5A0A075B604 Gm42778-201ENSMUST00000199644 553 ntBASIC15.76■□□□□ 0.11
Trav7n-5A0A075B604 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.76■□□□□ 0.11
Trav7n-5A0A075B604 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7n-5A0A075B604 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
Trav7n-5A0A075B604 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav7n-5A0A075B604 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7n-5A0A075B604 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7n-5A0A075B604 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7n-5A0A075B604 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav7n-5A0A075B604 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
Trav7n-5A0A075B604 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.75■□□□□ 0.11
Trav7n-5A0A075B604 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.75■□□□□ 0.11
Trav7n-5A0A075B604 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7n-5A0A075B604 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.75■□□□□ 0.11
Trav7n-5A0A075B604 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Trav7n-5A0A075B604 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav7n-5A0A075B604 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7n-5A0A075B604 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Trav7n-5A0A075B604 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7n-5A0A075B604 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7n-5A0A075B604 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7n-5A0A075B604 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7n-5A0A075B604 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7n-5A0A075B604 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7n-5A0A075B604 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7n-5A0A075B604 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
Trav7n-5A0A075B604 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7n-5A0A075B604 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.74■□□□□ 0.11
Trav7n-5A0A075B604 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7n-5A0A075B604 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav7n-5A0A075B604 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Trav7n-5A0A075B604 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7n-5A0A075B604 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7n-5A0A075B604 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Trav7n-5A0A075B604 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7n-5A0A075B604 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7n-5A0A075B604 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7n-5A0A075B604 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trav7n-5A0A075B604 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7n-5A0A075B604 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7n-5A0A075B604 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7n-5A0A075B604 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7n-5A0A075B604 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7n-5A0A075B604 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav7n-5A0A075B604 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7n-5A0A075B604 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7n-5A0A075B604 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Trav7n-5A0A075B604 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7n-5A0A075B604 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7n-5A0A075B604 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7n-5A0A075B604 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7n-5A0A075B604 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7n-5A0A075B604 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7n-5A0A075B604 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.72■□□□□ 0.11
Trav7n-5A0A075B604 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav7n-5A0A075B604 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7n-5A0A075B604 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Trav7n-5A0A075B604 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav7n-5A0A075B604 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7n-5A0A075B604 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7n-5A0A075B604 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav7n-5A0A075B604 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7n-5A0A075B604 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7n-5A0A075B604 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7n-5A0A075B604 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7n-5A0A075B604 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7n-5A0A075B604 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7n-5A0A075B604 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav7n-5A0A075B604 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7n-5A0A075B604 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7n-5A0A075B604 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7n-5A0A075B604 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7n-5A0A075B604 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7n-5A0A075B604 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Trav7n-5A0A075B604 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trav7n-5A0A075B604 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7n-5A0A075B604 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav7n-5A0A075B604 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trav7n-5A0A075B604 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7n-5A0A075B604 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav7n-5A0A075B604 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7n-5A0A075B604 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trav7n-5A0A075B604 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7n-5A0A075B604 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.7■□□□□ 0.1
Trav7n-5A0A075B604 Gm13234-201ENSMUST00000120010 747 ntBASIC15.7■□□□□ 0.1
Trav7n-5A0A075B604 Gm42642-201ENSMUST00000200683 355 ntBASIC15.7■□□□□ 0.1
Trav7n-5A0A075B604 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7n-5A0A075B604 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trav7n-5A0A075B604 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7n-5A0A075B604 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7n-5A0A075B604 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7n-5A0A075B604 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7n-5A0A075B604 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7n-5A0A075B604 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav7n-5A0A075B604 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7n-5A0A075B604 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.7■□□□□ 0.1
Trav7n-5A0A075B604 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7n-5A0A075B604 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms