Protein–RNA interactions for Protein: Q9Z0E0

Ncdn, Neurochondrin, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcdnQ9Z0E0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
NcdnQ9Z0E0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NcdnQ9Z0E0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NcdnQ9Z0E0 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.24■□□□□ 0.67
NcdnQ9Z0E0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NcdnQ9Z0E0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NcdnQ9Z0E0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NcdnQ9Z0E0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NcdnQ9Z0E0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
NcdnQ9Z0E0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
NcdnQ9Z0E0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NcdnQ9Z0E0 Gm13534-201ENSMUST00000121169 513 ntBASIC19.24■□□□□ 0.67
NcdnQ9Z0E0 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.24■□□□□ 0.67
NcdnQ9Z0E0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NcdnQ9Z0E0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NcdnQ9Z0E0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NcdnQ9Z0E0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NcdnQ9Z0E0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NcdnQ9Z0E0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NcdnQ9Z0E0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NcdnQ9Z0E0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NcdnQ9Z0E0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NcdnQ9Z0E0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NcdnQ9Z0E0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NcdnQ9Z0E0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NcdnQ9Z0E0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NcdnQ9Z0E0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NcdnQ9Z0E0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.22■□□□□ 0.67
NcdnQ9Z0E0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NcdnQ9Z0E0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.22■□□□□ 0.67
NcdnQ9Z0E0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
NcdnQ9Z0E0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.22■□□□□ 0.67
NcdnQ9Z0E0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.22■□□□□ 0.67
NcdnQ9Z0E0 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.22■□□□□ 0.67
NcdnQ9Z0E0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NcdnQ9Z0E0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NcdnQ9Z0E0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NcdnQ9Z0E0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.22■□□□□ 0.67
NcdnQ9Z0E0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NcdnQ9Z0E0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NcdnQ9Z0E0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NcdnQ9Z0E0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NcdnQ9Z0E0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NcdnQ9Z0E0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
NcdnQ9Z0E0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NcdnQ9Z0E0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NcdnQ9Z0E0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.21■□□□□ 0.67
NcdnQ9Z0E0 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.21■□□□□ 0.67
NcdnQ9Z0E0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
NcdnQ9Z0E0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
NcdnQ9Z0E0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NcdnQ9Z0E0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NcdnQ9Z0E0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NcdnQ9Z0E0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
NcdnQ9Z0E0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NcdnQ9Z0E0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
NcdnQ9Z0E0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.2■□□□□ 0.66
NcdnQ9Z0E0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NcdnQ9Z0E0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NcdnQ9Z0E0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NcdnQ9Z0E0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NcdnQ9Z0E0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NcdnQ9Z0E0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NcdnQ9Z0E0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
NcdnQ9Z0E0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NcdnQ9Z0E0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NcdnQ9Z0E0 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.19■□□□□ 0.66
NcdnQ9Z0E0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NcdnQ9Z0E0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NcdnQ9Z0E0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NcdnQ9Z0E0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NcdnQ9Z0E0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NcdnQ9Z0E0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NcdnQ9Z0E0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NcdnQ9Z0E0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.18■□□□□ 0.66
NcdnQ9Z0E0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NcdnQ9Z0E0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NcdnQ9Z0E0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NcdnQ9Z0E0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
NcdnQ9Z0E0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
NcdnQ9Z0E0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NcdnQ9Z0E0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NcdnQ9Z0E0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
NcdnQ9Z0E0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NcdnQ9Z0E0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NcdnQ9Z0E0 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.18■□□□□ 0.66
NcdnQ9Z0E0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NcdnQ9Z0E0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NcdnQ9Z0E0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NcdnQ9Z0E0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NcdnQ9Z0E0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NcdnQ9Z0E0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NcdnQ9Z0E0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NcdnQ9Z0E0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NcdnQ9Z0E0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NcdnQ9Z0E0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NcdnQ9Z0E0 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NcdnQ9Z0E0 Gm37055-201ENSMUST00000191866 133 ntBASIC19.17■□□□□ 0.66
NcdnQ9Z0E0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.17■□□□□ 0.66
NcdnQ9Z0E0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms