Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tubd1Q9R1K7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.72■□□□□ 0.75
Tubd1Q9R1K7 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tubd1Q9R1K7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tubd1Q9R1K7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tubd1Q9R1K7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Tubd1Q9R1K7 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.72■□□□□ 0.75
Tubd1Q9R1K7 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tubd1Q9R1K7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tubd1Q9R1K7 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Tubd1Q9R1K7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Tubd1Q9R1K7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tubd1Q9R1K7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tubd1Q9R1K7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubd1Q9R1K7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubd1Q9R1K7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubd1Q9R1K7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
Tubd1Q9R1K7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.71■□□□□ 0.75
Tubd1Q9R1K7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubd1Q9R1K7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.71■□□□□ 0.75
Tubd1Q9R1K7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tubd1Q9R1K7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.7■□□□□ 0.74
Tubd1Q9R1K7 Gm7860-201ENSMUST00000121190 879 ntBASIC19.7■□□□□ 0.74
Tubd1Q9R1K7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tubd1Q9R1K7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.7■□□□□ 0.74
Tubd1Q9R1K7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tubd1Q9R1K7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.7■□□□□ 0.74
Tubd1Q9R1K7 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.69■□□□□ 0.74
Tubd1Q9R1K7 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tubd1Q9R1K7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tubd1Q9R1K7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tubd1Q9R1K7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tubd1Q9R1K7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tubd1Q9R1K7 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tubd1Q9R1K7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tubd1Q9R1K7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.68■□□□□ 0.74
Tubd1Q9R1K7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tubd1Q9R1K7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tubd1Q9R1K7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Tubd1Q9R1K7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tubd1Q9R1K7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tubd1Q9R1K7 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tubd1Q9R1K7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tubd1Q9R1K7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tubd1Q9R1K7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tubd1Q9R1K7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tubd1Q9R1K7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Tubd1Q9R1K7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Tubd1Q9R1K7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tubd1Q9R1K7 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.66■□□□□ 0.74
Tubd1Q9R1K7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tubd1Q9R1K7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tubd1Q9R1K7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.66■□□□□ 0.74
Tubd1Q9R1K7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Tubd1Q9R1K7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tubd1Q9R1K7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.66■□□□□ 0.74
Tubd1Q9R1K7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tubd1Q9R1K7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tubd1Q9R1K7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Tubd1Q9R1K7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tubd1Q9R1K7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.65■□□□□ 0.74
Tubd1Q9R1K7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Tubd1Q9R1K7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tubd1Q9R1K7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tubd1Q9R1K7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tubd1Q9R1K7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Tubd1Q9R1K7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tubd1Q9R1K7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tubd1Q9R1K7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tubd1Q9R1K7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tubd1Q9R1K7 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tubd1Q9R1K7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tubd1Q9R1K7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.64■□□□□ 0.73
Tubd1Q9R1K7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tubd1Q9R1K7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tubd1Q9R1K7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tubd1Q9R1K7 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tubd1Q9R1K7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tubd1Q9R1K7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tubd1Q9R1K7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tubd1Q9R1K7 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.64■□□□□ 0.73
Tubd1Q9R1K7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tubd1Q9R1K7 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.64■□□□□ 0.73
Tubd1Q9R1K7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tubd1Q9R1K7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tubd1Q9R1K7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tubd1Q9R1K7 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tubd1Q9R1K7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tubd1Q9R1K7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tubd1Q9R1K7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tubd1Q9R1K7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tubd1Q9R1K7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.63■□□□□ 0.73
Tubd1Q9R1K7 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.63■□□□□ 0.73
Tubd1Q9R1K7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tubd1Q9R1K7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.63■□□□□ 0.73
Tubd1Q9R1K7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tubd1Q9R1K7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tubd1Q9R1K7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tubd1Q9R1K7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tubd1Q9R1K7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms