Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh17Q9R100 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh17Q9R100 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cdh17Q9R100 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cdh17Q9R100 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.8■□□□□ 0.6
Cdh17Q9R100 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh17Q9R100 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh17Q9R100 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh17Q9R100 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh17Q9R100 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh17Q9R100 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.8■□□□□ 0.6
Cdh17Q9R100 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh17Q9R100 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh17Q9R100 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.8■□□□□ 0.6
Cdh17Q9R100 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh17Q9R100 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh17Q9R100 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh17Q9R100 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh17Q9R100 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.79■□□□□ 0.6
Cdh17Q9R100 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.79■□□□□ 0.6
Cdh17Q9R100 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh17Q9R100 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh17Q9R100 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh17Q9R100 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh17Q9R100 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh17Q9R100 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh17Q9R100 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cdh17Q9R100 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh17Q9R100 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh17Q9R100 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.79■□□□□ 0.6
Cdh17Q9R100 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cdh17Q9R100 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cdh17Q9R100 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdh17Q9R100 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.78■□□□□ 0.6
Cdh17Q9R100 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.78■□□□□ 0.6
Cdh17Q9R100 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdh17Q9R100 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdh17Q9R100 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdh17Q9R100 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cdh17Q9R100 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdh17Q9R100 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh17Q9R100 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh17Q9R100 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh17Q9R100 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh17Q9R100 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh17Q9R100 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh17Q9R100 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh17Q9R100 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh17Q9R100 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh17Q9R100 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Cdh17Q9R100 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh17Q9R100 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh17Q9R100 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.77■□□□□ 0.6
Cdh17Q9R100 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh17Q9R100 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh17Q9R100 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
Cdh17Q9R100 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cdh17Q9R100 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh17Q9R100 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh17Q9R100 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.76■□□□□ 0.59
Cdh17Q9R100 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh17Q9R100 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh17Q9R100 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh17Q9R100 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh17Q9R100 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh17Q9R100 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh17Q9R100 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh17Q9R100 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cdh17Q9R100 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Cdh17Q9R100 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh17Q9R100 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdh17Q9R100 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cdh17Q9R100 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.75■□□□□ 0.59
Cdh17Q9R100 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cdh17Q9R100 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Cdh17Q9R100 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.75■□□□□ 0.59
Cdh17Q9R100 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdh17Q9R100 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh17Q9R100 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh17Q9R100 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh17Q9R100 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh17Q9R100 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh17Q9R100 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh17Q9R100 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh17Q9R100 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.74■□□□□ 0.59
Cdh17Q9R100 BC021767-201ENSMUST00000126387 1716 ntBASIC18.74■□□□□ 0.59
Cdh17Q9R100 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh17Q9R100 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cdh17Q9R100 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh17Q9R100 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh17Q9R100 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Cdh17Q9R100 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh17Q9R100 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh17Q9R100 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh17Q9R100 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.73■□□□□ 0.59
Cdh17Q9R100 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.73■□□□□ 0.59
Cdh17Q9R100 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh17Q9R100 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh17Q9R100 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh17Q9R100 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms