Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Shroom3Q9QXN0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.39■□□□□ 0.69
Shroom3Q9QXN0 AV356131-201ENSMUST00000206201 750 ntBASIC19.39■□□□□ 0.69
Shroom3Q9QXN0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.39■□□□□ 0.69
Shroom3Q9QXN0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shroom3Q9QXN0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.38■□□□□ 0.69
Shroom3Q9QXN0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shroom3Q9QXN0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Shroom3Q9QXN0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shroom3Q9QXN0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shroom3Q9QXN0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shroom3Q9QXN0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shroom3Q9QXN0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shroom3Q9QXN0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shroom3Q9QXN0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Shroom3Q9QXN0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shroom3Q9QXN0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Shroom3Q9QXN0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Shroom3Q9QXN0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shroom3Q9QXN0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Shroom3Q9QXN0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shroom3Q9QXN0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shroom3Q9QXN0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Shroom3Q9QXN0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shroom3Q9QXN0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Shroom3Q9QXN0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shroom3Q9QXN0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shroom3Q9QXN0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Shroom3Q9QXN0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shroom3Q9QXN0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Shroom3Q9QXN0 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.36■□□□□ 0.69
Shroom3Q9QXN0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shroom3Q9QXN0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Shroom3Q9QXN0 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.36■□□□□ 0.69
Shroom3Q9QXN0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shroom3Q9QXN0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.36■□□□□ 0.69
Shroom3Q9QXN0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shroom3Q9QXN0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shroom3Q9QXN0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shroom3Q9QXN0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shroom3Q9QXN0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shroom3Q9QXN0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shroom3Q9QXN0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.35■□□□□ 0.69
Shroom3Q9QXN0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shroom3Q9QXN0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shroom3Q9QXN0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Shroom3Q9QXN0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Shroom3Q9QXN0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shroom3Q9QXN0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.35■□□□□ 0.69
Shroom3Q9QXN0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shroom3Q9QXN0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Shroom3Q9QXN0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Shroom3Q9QXN0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shroom3Q9QXN0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.35■□□□□ 0.69
Shroom3Q9QXN0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shroom3Q9QXN0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shroom3Q9QXN0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Shroom3Q9QXN0 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.35■□□□□ 0.69
Shroom3Q9QXN0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Shroom3Q9QXN0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Shroom3Q9QXN0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Shroom3Q9QXN0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
Shroom3Q9QXN0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Shroom3Q9QXN0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.34■□□□□ 0.69
Shroom3Q9QXN0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Shroom3Q9QXN0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shroom3Q9QXN0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shroom3Q9QXN0 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.34■□□□□ 0.69
Shroom3Q9QXN0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Shroom3Q9QXN0 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Shroom3Q9QXN0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.33■□□□□ 0.69
Shroom3Q9QXN0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.33■□□□□ 0.69
Shroom3Q9QXN0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.33■□□□□ 0.69
Shroom3Q9QXN0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Shroom3Q9QXN0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Shroom3Q9QXN0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shroom3Q9QXN0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shroom3Q9QXN0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shroom3Q9QXN0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.33■□□□□ 0.68
Shroom3Q9QXN0 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shroom3Q9QXN0 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.33■□□□□ 0.68
Shroom3Q9QXN0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shroom3Q9QXN0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shroom3Q9QXN0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shroom3Q9QXN0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Shroom3Q9QXN0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Shroom3Q9QXN0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shroom3Q9QXN0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.32■□□□□ 0.68
Shroom3Q9QXN0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.32■□□□□ 0.68
Shroom3Q9QXN0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.32■□□□□ 0.68
Shroom3Q9QXN0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Shroom3Q9QXN0 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Shroom3Q9QXN0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shroom3Q9QXN0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shroom3Q9QXN0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shroom3Q9QXN0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shroom3Q9QXN0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shroom3Q9QXN0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Shroom3Q9QXN0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Shroom3Q9QXN0 Gm18671-201ENSMUST00000214826 683 ntBASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms