Protein–RNA interactions for Protein: Q9ESJ4

Nckipsd, NCK-interacting protein with SH3 domain, mousemouse

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NckipsdQ9ESJ4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NckipsdQ9ESJ4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
NckipsdQ9ESJ4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
NckipsdQ9ESJ4 Notumos-201ENSMUST00000151998 2659 ntBASIC20.12■□□□□ 0.81
NckipsdQ9ESJ4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NckipsdQ9ESJ4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
NckipsdQ9ESJ4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NckipsdQ9ESJ4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NckipsdQ9ESJ4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NckipsdQ9ESJ4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NckipsdQ9ESJ4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NckipsdQ9ESJ4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
NckipsdQ9ESJ4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NckipsdQ9ESJ4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NckipsdQ9ESJ4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
NckipsdQ9ESJ4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.11■□□□□ 0.81
NckipsdQ9ESJ4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NckipsdQ9ESJ4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NckipsdQ9ESJ4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NckipsdQ9ESJ4 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NckipsdQ9ESJ4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NckipsdQ9ESJ4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
NckipsdQ9ESJ4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NckipsdQ9ESJ4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
NckipsdQ9ESJ4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NckipsdQ9ESJ4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NckipsdQ9ESJ4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
NckipsdQ9ESJ4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NckipsdQ9ESJ4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NckipsdQ9ESJ4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NckipsdQ9ESJ4 Mir5133-201ENSMUST00000174955 77 ntBASIC20.1■□□□□ 0.81
NckipsdQ9ESJ4 Gm27011-201ENSMUST00000182352 972 ntBASIC20.1■□□□□ 0.81
NckipsdQ9ESJ4 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.1■□□□□ 0.81
NckipsdQ9ESJ4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NckipsdQ9ESJ4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NckipsdQ9ESJ4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NckipsdQ9ESJ4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NckipsdQ9ESJ4 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.09■□□□□ 0.81
NckipsdQ9ESJ4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.09■□□□□ 0.81
NckipsdQ9ESJ4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.09■□□□□ 0.81
NckipsdQ9ESJ4 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NckipsdQ9ESJ4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.09■□□□□ 0.81
NckipsdQ9ESJ4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NckipsdQ9ESJ4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NckipsdQ9ESJ4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NckipsdQ9ESJ4 Gm13534-201ENSMUST00000121169 513 ntBASIC20.08■□□□□ 0.81
NckipsdQ9ESJ4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
NckipsdQ9ESJ4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
NckipsdQ9ESJ4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NckipsdQ9ESJ4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NckipsdQ9ESJ4 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NckipsdQ9ESJ4 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
NckipsdQ9ESJ4 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NckipsdQ9ESJ4 Gm7860-201ENSMUST00000121190 879 ntBASIC20.07■□□□□ 0.8
NckipsdQ9ESJ4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.07■□□□□ 0.8
NckipsdQ9ESJ4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.07■□□□□ 0.8
NckipsdQ9ESJ4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NckipsdQ9ESJ4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NckipsdQ9ESJ4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
NckipsdQ9ESJ4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NckipsdQ9ESJ4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NckipsdQ9ESJ4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NckipsdQ9ESJ4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NckipsdQ9ESJ4 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
NckipsdQ9ESJ4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NckipsdQ9ESJ4 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.06■□□□□ 0.8
NckipsdQ9ESJ4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NckipsdQ9ESJ4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.06■□□□□ 0.8
NckipsdQ9ESJ4 Gm6420-201ENSMUST00000193885 723 ntBASIC20.06■□□□□ 0.8
NckipsdQ9ESJ4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NckipsdQ9ESJ4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
NckipsdQ9ESJ4 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
NckipsdQ9ESJ4 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
NckipsdQ9ESJ4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NckipsdQ9ESJ4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NckipsdQ9ESJ4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NckipsdQ9ESJ4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.05■□□□□ 0.8
NckipsdQ9ESJ4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
NckipsdQ9ESJ4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NckipsdQ9ESJ4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NckipsdQ9ESJ4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.05■□□□□ 0.8
NckipsdQ9ESJ4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NckipsdQ9ESJ4 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.05■□□□□ 0.8
NckipsdQ9ESJ4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
NckipsdQ9ESJ4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NckipsdQ9ESJ4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NckipsdQ9ESJ4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NckipsdQ9ESJ4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NckipsdQ9ESJ4 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.04■□□□□ 0.8
NckipsdQ9ESJ4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.04■□□□□ 0.8
NckipsdQ9ESJ4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.04■□□□□ 0.8
NckipsdQ9ESJ4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
NckipsdQ9ESJ4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.04■□□□□ 0.8
NckipsdQ9ESJ4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NckipsdQ9ESJ4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
NckipsdQ9ESJ4 Nespas-201ENSMUST00000143738 1083 ntBASIC20.03■□□□□ 0.8
NckipsdQ9ESJ4 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
NckipsdQ9ESJ4 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
NckipsdQ9ESJ4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
NckipsdQ9ESJ4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms