Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rtp4Q9ER80 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rtp4Q9ER80 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rtp4Q9ER80 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.06■□□□□ 0.48
Rtp4Q9ER80 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.06■□□□□ 0.48
Rtp4Q9ER80 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rtp4Q9ER80 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rtp4Q9ER80 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rtp4Q9ER80 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Rtp4Q9ER80 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Rtp4Q9ER80 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rtp4Q9ER80 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rtp4Q9ER80 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rtp4Q9ER80 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rtp4Q9ER80 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rtp4Q9ER80 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rtp4Q9ER80 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rtp4Q9ER80 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rtp4Q9ER80 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.05■□□□□ 0.48
Rtp4Q9ER80 Mir6236-201ENSMUST00000184437 123 ntBASIC18.05■□□□□ 0.48
Rtp4Q9ER80 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rtp4Q9ER80 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rtp4Q9ER80 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rtp4Q9ER80 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rtp4Q9ER80 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtp4Q9ER80 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtp4Q9ER80 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rtp4Q9ER80 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.04■□□□□ 0.48
Rtp4Q9ER80 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtp4Q9ER80 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtp4Q9ER80 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rtp4Q9ER80 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtp4Q9ER80 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtp4Q9ER80 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Rtp4Q9ER80 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtp4Q9ER80 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtp4Q9ER80 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtp4Q9ER80 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtp4Q9ER80 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtp4Q9ER80 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtp4Q9ER80 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.03■□□□□ 0.48
Rtp4Q9ER80 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.03■□□□□ 0.48
Rtp4Q9ER80 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.03■□□□□ 0.48
Rtp4Q9ER80 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.03■□□□□ 0.48
Rtp4Q9ER80 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.03■□□□□ 0.48
Rtp4Q9ER80 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.03■□□□□ 0.48
Rtp4Q9ER80 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtp4Q9ER80 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtp4Q9ER80 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtp4Q9ER80 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtp4Q9ER80 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rtp4Q9ER80 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rtp4Q9ER80 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Rtp4Q9ER80 Gm29257-201ENSMUST00000186115 639 ntBASIC18.02■□□□□ 0.48
Rtp4Q9ER80 Gm42642-201ENSMUST00000200683 355 ntBASIC18.02■□□□□ 0.48
Rtp4Q9ER80 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.02■□□□□ 0.48
Rtp4Q9ER80 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rtp4Q9ER80 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rtp4Q9ER80 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Rtp4Q9ER80 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtp4Q9ER80 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtp4Q9ER80 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rtp4Q9ER80 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtp4Q9ER80 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtp4Q9ER80 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtp4Q9ER80 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtp4Q9ER80 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtp4Q9ER80 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtp4Q9ER80 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtp4Q9ER80 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rtp4Q9ER80 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Rtp4Q9ER80 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rtp4Q9ER80 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rtp4Q9ER80 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rtp4Q9ER80 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18■□□□□ 0.47
Rtp4Q9ER80 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Rtp4Q9ER80 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18■□□□□ 0.47
Rtp4Q9ER80 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rtp4Q9ER80 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Rtp4Q9ER80 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Rtp4Q9ER80 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rtp4Q9ER80 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtp4Q9ER80 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtp4Q9ER80 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtp4Q9ER80 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rtp4Q9ER80 Gm11421-201ENSMUST00000122124 294 ntBASIC17.99■□□□□ 0.47
Rtp4Q9ER80 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.99■□□□□ 0.47
Rtp4Q9ER80 Gm7291-201ENSMUST00000199147 382 ntBASIC17.99■□□□□ 0.47
Rtp4Q9ER80 Gm42569-201ENSMUST00000200539 472 ntBASIC17.99■□□□□ 0.47
Rtp4Q9ER80 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Rtp4Q9ER80 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtp4Q9ER80 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtp4Q9ER80 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtp4Q9ER80 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Rtp4Q9ER80 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtp4Q9ER80 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtp4Q9ER80 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtp4Q9ER80 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtp4Q9ER80 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtp4Q9ER80 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms