Protein–RNA interactions for Protein: Q9D7U6

Cldn22, Claudin-22, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn22Q9D7U6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.37■□□□□ 0.69
Cldn22Q9D7U6 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cldn22Q9D7U6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.37■□□□□ 0.69
Cldn22Q9D7U6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn22Q9D7U6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn22Q9D7U6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn22Q9D7U6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn22Q9D7U6 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn22Q9D7U6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn22Q9D7U6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cldn22Q9D7U6 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn22Q9D7U6 Gm43060-201ENSMUST00000200621 289 ntBASIC19.36■□□□□ 0.69
Cldn22Q9D7U6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn22Q9D7U6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn22Q9D7U6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn22Q9D7U6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn22Q9D7U6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn22Q9D7U6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn22Q9D7U6 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.35■□□□□ 0.69
Cldn22Q9D7U6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn22Q9D7U6 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.35■□□□□ 0.69
Cldn22Q9D7U6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn22Q9D7U6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn22Q9D7U6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Cldn22Q9D7U6 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn22Q9D7U6 Smad6-203ENSMUST00000179458 273 ntBASIC19.35■□□□□ 0.69
Cldn22Q9D7U6 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cldn22Q9D7U6 Gm5874-201ENSMUST00000096101 508 ntBASIC19.35■□□□□ 0.69
Cldn22Q9D7U6 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn22Q9D7U6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Cldn22Q9D7U6 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn22Q9D7U6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn22Q9D7U6 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn22Q9D7U6 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn22Q9D7U6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn22Q9D7U6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn22Q9D7U6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn22Q9D7U6 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.34■□□□□ 0.69
Cldn22Q9D7U6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn22Q9D7U6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn22Q9D7U6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn22Q9D7U6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cldn22Q9D7U6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cldn22Q9D7U6 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cldn22Q9D7U6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cldn22Q9D7U6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
Cldn22Q9D7U6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cldn22Q9D7U6 Golph3-205ENSMUST00000228671 2842 ntBASIC19.33■□□□□ 0.69
Cldn22Q9D7U6 Mir6236-201ENSMUST00000184437 123 ntBASIC19.33■□□□□ 0.68
Cldn22Q9D7U6 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.33■□□□□ 0.68
Cldn22Q9D7U6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cldn22Q9D7U6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cldn22Q9D7U6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cldn22Q9D7U6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cldn22Q9D7U6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cldn22Q9D7U6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cldn22Q9D7U6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cldn22Q9D7U6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn22Q9D7U6 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn22Q9D7U6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn22Q9D7U6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn22Q9D7U6 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn22Q9D7U6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn22Q9D7U6 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.32■□□□□ 0.68
Cldn22Q9D7U6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Cldn22Q9D7U6 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn22Q9D7U6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.32■□□□□ 0.68
Cldn22Q9D7U6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn22Q9D7U6 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn22Q9D7U6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn22Q9D7U6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn22Q9D7U6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn22Q9D7U6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn22Q9D7U6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn22Q9D7U6 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn22Q9D7U6 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn22Q9D7U6 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.31■□□□□ 0.68
Cldn22Q9D7U6 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn22Q9D7U6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn22Q9D7U6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn22Q9D7U6 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cldn22Q9D7U6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn22Q9D7U6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn22Q9D7U6 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.3■□□□□ 0.68
Cldn22Q9D7U6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn22Q9D7U6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn22Q9D7U6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn22Q9D7U6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn22Q9D7U6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.29■□□□□ 0.68
Cldn22Q9D7U6 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn22Q9D7U6 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.29■□□□□ 0.68
Cldn22Q9D7U6 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn22Q9D7U6 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn22Q9D7U6 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn22Q9D7U6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Cldn22Q9D7U6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn22Q9D7U6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn22Q9D7U6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cldn22Q9D7U6 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Cldn22Q9D7U6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms