Protein–RNA interactions for Protein: Q9D1C9

Rrp7a, Ribosomal RNA-processing protein 7 homolog A, mousemouse

Known RBP Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp7aQ9D1C9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rrp7aQ9D1C9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rrp7aQ9D1C9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC28.35■■■□□ 2.13
Rrp7aQ9D1C9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rrp7aQ9D1C9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rrp7aQ9D1C9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC28.35■■■□□ 2.13
Rrp7aQ9D1C9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC28.35■■■□□ 2.13
Rrp7aQ9D1C9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Rrp7aQ9D1C9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rrp7aQ9D1C9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
Rrp7aQ9D1C9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Rrp7aQ9D1C9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rrp7aQ9D1C9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rrp7aQ9D1C9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rrp7aQ9D1C9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Rrp7aQ9D1C9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Rrp7aQ9D1C9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC28.34■■■□□ 2.13
Rrp7aQ9D1C9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC28.34■■■□□ 2.13
Rrp7aQ9D1C9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Rrp7aQ9D1C9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Rrp7aQ9D1C9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC28.33■■■□□ 2.13
Rrp7aQ9D1C9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Rrp7aQ9D1C9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
Rrp7aQ9D1C9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Rrp7aQ9D1C9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Rrp7aQ9D1C9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
Rrp7aQ9D1C9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Rrp7aQ9D1C9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Rrp7aQ9D1C9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Rrp7aQ9D1C9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
Rrp7aQ9D1C9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Rrp7aQ9D1C9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC28.31■■■□□ 2.12
Rrp7aQ9D1C9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
Rrp7aQ9D1C9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Rrp7aQ9D1C9 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Rrp7aQ9D1C9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC28.31■■■□□ 2.12
Rrp7aQ9D1C9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Rrp7aQ9D1C9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Rrp7aQ9D1C9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Rrp7aQ9D1C9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Rrp7aQ9D1C9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Rrp7aQ9D1C9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC28.29■■■□□ 2.12
Rrp7aQ9D1C9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Rrp7aQ9D1C9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC28.29■■■□□ 2.12
Rrp7aQ9D1C9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC28.29■■■□□ 2.12
Rrp7aQ9D1C9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
Rrp7aQ9D1C9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC28.29■■■□□ 2.12
Rrp7aQ9D1C9 Mir7071-201ENSMUST00000184847 69 ntBASIC28.29■■■□□ 2.12
Rrp7aQ9D1C9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Rrp7aQ9D1C9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Rrp7aQ9D1C9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
Rrp7aQ9D1C9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Rrp7aQ9D1C9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC28.29■■■□□ 2.12
Rrp7aQ9D1C9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Rrp7aQ9D1C9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Rrp7aQ9D1C9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC28.28■■■□□ 2.12
Rrp7aQ9D1C9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC28.28■■■□□ 2.12
Rrp7aQ9D1C9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Rrp7aQ9D1C9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC28.28■■■□□ 2.12
Rrp7aQ9D1C9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Rrp7aQ9D1C9 Gm27032-201ENSMUST00000183124 1116 ntBASIC28.28■■■□□ 2.12
Rrp7aQ9D1C9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
Rrp7aQ9D1C9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Rrp7aQ9D1C9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC28.27■■■□□ 2.12
Rrp7aQ9D1C9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
Rrp7aQ9D1C9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Rrp7aQ9D1C9 Gm27275-201ENSMUST00000184318 272 ntBASIC28.27■■■□□ 2.12
Rrp7aQ9D1C9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC28.27■■■□□ 2.12
Rrp7aQ9D1C9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Rrp7aQ9D1C9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Rrp7aQ9D1C9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
Rrp7aQ9D1C9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Rrp7aQ9D1C9 Gm13181-201ENSMUST00000120117 1069 ntBASIC28.26■■■□□ 2.11
Rrp7aQ9D1C9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC28.26■■■□□ 2.11
Rrp7aQ9D1C9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Rrp7aQ9D1C9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
Rrp7aQ9D1C9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
Rrp7aQ9D1C9 Gm6802-201ENSMUST00000167843 1983 ntBASIC28.26■■■□□ 2.11
Rrp7aQ9D1C9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC28.25■■■□□ 2.11
Rrp7aQ9D1C9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Rrp7aQ9D1C9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC28.25■■■□□ 2.11
Rrp7aQ9D1C9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
Rrp7aQ9D1C9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Rrp7aQ9D1C9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC28.25■■■□□ 2.11
Rrp7aQ9D1C9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC28.25■■■□□ 2.11
Rrp7aQ9D1C9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Rrp7aQ9D1C9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Rrp7aQ9D1C9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Rrp7aQ9D1C9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC28.24■■■□□ 2.11
Rrp7aQ9D1C9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Rrp7aQ9D1C9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Rrp7aQ9D1C9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Rrp7aQ9D1C9 Gm13509-201ENSMUST00000119733 1308 ntBASIC28.23■■■□□ 2.11
Rrp7aQ9D1C9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
Rrp7aQ9D1C9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
Rrp7aQ9D1C9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
Rrp7aQ9D1C9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
Rrp7aQ9D1C9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Rrp7aQ9D1C9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Rrp7aQ9D1C9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms