Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.01■□□□□ 0.95
Lysmd1Q9D0E3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.01■□□□□ 0.95
Lysmd1Q9D0E3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC21.01■□□□□ 0.95
Lysmd1Q9D0E3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lysmd1Q9D0E3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lysmd1Q9D0E3 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.01■□□□□ 0.95
Lysmd1Q9D0E3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Lysmd1Q9D0E3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
Lysmd1Q9D0E3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
Lysmd1Q9D0E3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lysmd1Q9D0E3 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lysmd1Q9D0E3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lysmd1Q9D0E3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lysmd1Q9D0E3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lysmd1Q9D0E3 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Lysmd1Q9D0E3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.99■□□□□ 0.95
Lysmd1Q9D0E3 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Lysmd1Q9D0E3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Lysmd1Q9D0E3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lysmd1Q9D0E3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.99■□□□□ 0.95
Lysmd1Q9D0E3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Lysmd1Q9D0E3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lysmd1Q9D0E3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.98■□□□□ 0.95
Lysmd1Q9D0E3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Lysmd1Q9D0E3 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Lysmd1Q9D0E3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.98■□□□□ 0.95
Lysmd1Q9D0E3 Gm21814-202ENSMUST00000203277 873 ntBASIC20.98■□□□□ 0.95
Lysmd1Q9D0E3 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.98■□□□□ 0.95
Lysmd1Q9D0E3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Lysmd1Q9D0E3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lysmd1Q9D0E3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lysmd1Q9D0E3 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lysmd1Q9D0E3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Lysmd1Q9D0E3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lysmd1Q9D0E3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lysmd1Q9D0E3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.97■□□□□ 0.95
Lysmd1Q9D0E3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Lysmd1Q9D0E3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lysmd1Q9D0E3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lysmd1Q9D0E3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Lysmd1Q9D0E3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Lysmd1Q9D0E3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.96■□□□□ 0.95
Lysmd1Q9D0E3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Lysmd1Q9D0E3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Lysmd1Q9D0E3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Lysmd1Q9D0E3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lysmd1Q9D0E3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lysmd1Q9D0E3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lysmd1Q9D0E3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lysmd1Q9D0E3 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lysmd1Q9D0E3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Lysmd1Q9D0E3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
Lysmd1Q9D0E3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.95■□□□□ 0.94
Lysmd1Q9D0E3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.94■□□□□ 0.94
Lysmd1Q9D0E3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lysmd1Q9D0E3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lysmd1Q9D0E3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Lysmd1Q9D0E3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lysmd1Q9D0E3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lysmd1Q9D0E3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lysmd1Q9D0E3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lysmd1Q9D0E3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.94■□□□□ 0.94
Lysmd1Q9D0E3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lysmd1Q9D0E3 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lysmd1Q9D0E3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.93■□□□□ 0.94
Lysmd1Q9D0E3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lysmd1Q9D0E3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lysmd1Q9D0E3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lysmd1Q9D0E3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Lysmd1Q9D0E3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Lysmd1Q9D0E3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Lysmd1Q9D0E3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Lysmd1Q9D0E3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Lysmd1Q9D0E3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lysmd1Q9D0E3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Lysmd1Q9D0E3 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lysmd1Q9D0E3 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.92■□□□□ 0.94
Lysmd1Q9D0E3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lysmd1Q9D0E3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lysmd1Q9D0E3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lysmd1Q9D0E3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Lysmd1Q9D0E3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lysmd1Q9D0E3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Lysmd1Q9D0E3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lysmd1Q9D0E3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
Lysmd1Q9D0E3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Lysmd1Q9D0E3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.91■□□□□ 0.94
Lysmd1Q9D0E3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Lysmd1Q9D0E3 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Lysmd1Q9D0E3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.91■□□□□ 0.94
Lysmd1Q9D0E3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.91■□□□□ 0.94
Lysmd1Q9D0E3 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC20.91■□□□□ 0.94
Lysmd1Q9D0E3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.91■□□□□ 0.94
Lysmd1Q9D0E3 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lysmd1Q9D0E3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lysmd1Q9D0E3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lysmd1Q9D0E3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lysmd1Q9D0E3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.9■□□□□ 0.94
Lysmd1Q9D0E3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lysmd1Q9D0E3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms