Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Raet1eQ9CZQ6 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Raet1eQ9CZQ6 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Raet1eQ9CZQ6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Raet1eQ9CZQ6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Raet1eQ9CZQ6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Raet1eQ9CZQ6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Raet1eQ9CZQ6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.95■□□□□ 0.3
Raet1eQ9CZQ6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.95■□□□□ 0.3
Raet1eQ9CZQ6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Raet1eQ9CZQ6 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Raet1eQ9CZQ6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Raet1eQ9CZQ6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Raet1eQ9CZQ6 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Raet1eQ9CZQ6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.94■□□□□ 0.3
Raet1eQ9CZQ6 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Raet1eQ9CZQ6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Raet1eQ9CZQ6 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.94■□□□□ 0.3
Raet1eQ9CZQ6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.94■□□□□ 0.3
Raet1eQ9CZQ6 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Raet1eQ9CZQ6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Raet1eQ9CZQ6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Raet1eQ9CZQ6 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Raet1eQ9CZQ6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Raet1eQ9CZQ6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.94■□□□□ 0.3
Raet1eQ9CZQ6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Raet1eQ9CZQ6 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Raet1eQ9CZQ6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Raet1eQ9CZQ6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Raet1eQ9CZQ6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Raet1eQ9CZQ6 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Raet1eQ9CZQ6 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Raet1eQ9CZQ6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Raet1eQ9CZQ6 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Raet1eQ9CZQ6 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Raet1eQ9CZQ6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Raet1eQ9CZQ6 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Raet1eQ9CZQ6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Raet1eQ9CZQ6 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Raet1eQ9CZQ6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Raet1eQ9CZQ6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Raet1eQ9CZQ6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Raet1eQ9CZQ6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Raet1eQ9CZQ6 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Raet1eQ9CZQ6 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Raet1eQ9CZQ6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Raet1eQ9CZQ6 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Raet1eQ9CZQ6 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Raet1eQ9CZQ6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Raet1eQ9CZQ6 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Raet1eQ9CZQ6 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Raet1eQ9CZQ6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Raet1eQ9CZQ6 Gm43530-201ENSMUST00000195920 274 ntBASIC16.92■□□□□ 0.3
Raet1eQ9CZQ6 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.92■□□□□ 0.3
Raet1eQ9CZQ6 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Raet1eQ9CZQ6 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Raet1eQ9CZQ6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Raet1eQ9CZQ6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Raet1eQ9CZQ6 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Raet1eQ9CZQ6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Raet1eQ9CZQ6 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.91■□□□□ 0.3
Raet1eQ9CZQ6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Raet1eQ9CZQ6 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Raet1eQ9CZQ6 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Raet1eQ9CZQ6 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.91■□□□□ 0.3
Raet1eQ9CZQ6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Raet1eQ9CZQ6 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Raet1eQ9CZQ6 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.91■□□□□ 0.3
Raet1eQ9CZQ6 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Raet1eQ9CZQ6 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Raet1eQ9CZQ6 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Raet1eQ9CZQ6 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Raet1eQ9CZQ6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Raet1eQ9CZQ6 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Raet1eQ9CZQ6 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Raet1eQ9CZQ6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.91■□□□□ 0.3
Raet1eQ9CZQ6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.91■□□□□ 0.3
Raet1eQ9CZQ6 Gm45444-201ENSMUST00000211394 898 ntBASIC16.91■□□□□ 0.3
Raet1eQ9CZQ6 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.91■□□□□ 0.3
Raet1eQ9CZQ6 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Raet1eQ9CZQ6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Raet1eQ9CZQ6 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.91■□□□□ 0.3
Raet1eQ9CZQ6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Raet1eQ9CZQ6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Raet1eQ9CZQ6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Raet1eQ9CZQ6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Raet1eQ9CZQ6 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Raet1eQ9CZQ6 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Raet1eQ9CZQ6 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Raet1eQ9CZQ6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Raet1eQ9CZQ6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Raet1eQ9CZQ6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Raet1eQ9CZQ6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Raet1eQ9CZQ6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Raet1eQ9CZQ6 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Raet1eQ9CZQ6 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Raet1eQ9CZQ6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Raet1eQ9CZQ6 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Raet1eQ9CZQ6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.89■□□□□ 0.29
Raet1eQ9CZQ6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms